RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 MCTP2Q6DN12 878 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 LRRN4CLQ8ND94 238 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 ETNPPLQ8TBG4 499 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 FAM151AQ8WW52 585 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 LENG9Q96B70 501 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 TTYH3Q9C0H2 523 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 PCDHA12Q9UN75 941 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 TCP10L2B9ZVM9 353 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 Q4G0T1 1027 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 MIIPQ5JXC2 388 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 FOXR2Q6PJQ5 311 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 FBXO11Q86XK2 927 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 WDR24Q96S15 920 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUP188-205ENST00000477069 SLC39A2Q9NP94 309 aa12.85□□□□□ -0.35
NUP188-205ENST00000477069 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 RASSF10A6NK89 507 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 SREBF1P36956 1147 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
NUP188-205ENST00000477069 MTMR14Q8NCE2 650 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 DDX12PQ92771 950 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 CNOT6LQ96LI5 555 aaKnown RBP12.84□□□□□ -0.35
NUP188-205ENST00000477069 TUBGCP2Q9BSJ2 902 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 LRRC27Q9C0I9 530 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 VPS33BQ9H267 617 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 A0A0U1RQJ8 604 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 NKRFO15226 690 aaKnown RBP eCLIP12.84□□□□□ -0.35
NUP188-205ENST00000477069 RAD17O75943 681 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 TPM1P09493 284 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 DPEP1P16444 411 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 ECE1P42892 770 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 DNM2P50570 870 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 PSMD2Q13200 908 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 ATRIPQ8WXE1 791 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 DNAJC7Q99615 494 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
NUP188-205ENST00000477069 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
NUP188-205ENST00000477069 PGAP2Q9UHJ9 254 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
NUP188-205ENST00000477069 TTC26A0AVF1 554 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 B4DLN1 442 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 PIK3CDO00329 1044 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 TBX3O15119 743 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 TAL1P17542 331 aaPredicted RBP12.83□□□□□ -0.36
NUP188-205ENST00000477069 FKBP1CQ5VVH2 108 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 ZBED3Q96IU2 234 aaPredicted RBP12.83□□□□□ -0.36
NUP188-205ENST00000477069 NT5C3AQ9H0P0 336 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 CAPN11Q9UMQ6 739 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 TBC1D12O60347 775 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 CIITAP33076 1130 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 SLFN12Q8IYM2 578 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 PDCL2Q8N4E4 241 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 TMOD2Q9NZR1 351 aa12.83□□□□□ -0.36
NUP188-205ENST00000477069 KRT9P35527 623 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 DLGAP5Q15398 846 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 USH1GQ495M9 461 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 CYP26C1Q6V0L0 522 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 CREBRFQ8IUR6 639 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 ZBTB21Q9ULJ3 1066 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 ABCB11O95342 1321 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 FOSP01100 380 aaPredicted RBP12.82□□□□□ -0.36
NUP188-205ENST00000477069 FAM86B2P0C5J1 330 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 GNG11P61952 73 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 COASYQ13057 564 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 ZCWPW2Q504Y3 356 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 LRRC55Q6ZSA7 311 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 TEX2Q8IWB9 1127 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 GLIS3Q8NEA6 775 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
NUP188-205ENST00000477069 PCDHA2Q9Y5H9 948 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 MED24O75448 989 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 CYP3A4P08684 503 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 MAP3K9P80192 1104 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 ARHGEF10LQ9HCE6 1279 aa12.82□□□□□ -0.36
NUP188-205ENST00000477069 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 FRMD3A2A2Y4 597 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 POTECB2RU33 542 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 E9PMD0 336 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 STAT3P40763 770 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 STAT2P52630 851 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 MAP3K10Q02779 954 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 MEA1Q16626 185 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 SPICE1Q8N0Z3 855 aa12.81□□□□□ -0.36
NUP188-205ENST00000477069 ACRBPQ8NEB7 543 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms