RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 COA1Q9GZY4 146 aa23.43■■□□□ 1.34
LIMS2-214ENST00000476932 PLAGL2Q9UPG8 496 aa23.43■■□□□ 1.34
LIMS2-214ENST00000476932 WDR93Q6P2C0 686 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 DDX12PQ92771 950 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 IQCDQ96DY2 449 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 MXD3Q9BW11 206 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 SWAP70Q9UH65 585 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 MYH10P35580 1976 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 VAV2P52735 878 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 LRRC63Q05C16 580 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 MAN2A1Q16706 1144 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 KRT79Q5XKE5 535 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 MTMR8Q96EF0 704 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 ARHGAP20Q9P2F6 1191 aa23.42■■□□□ 1.34
LIMS2-214ENST00000476932 KRT26Q7Z3Y9 468 aa23.41■■□□□ 1.34
LIMS2-214ENST00000476932 GJA10Q969M2 543 aa23.41■■□□□ 1.34
LIMS2-214ENST00000476932 DNAJC19Q96DA6 116 aa23.41■■□□□ 1.34
LIMS2-214ENST00000476932 PDE11AQ9HCR9 933 aa23.41■■□□□ 1.34
LIMS2-214ENST00000476932 DDX25Q9UHL0 483 aaKnown RBP23.41■■□□□ 1.34
LIMS2-214ENST00000476932 ONECUT3O60422 494 aaPredicted RBP23.4■■□□□ 1.34
LIMS2-214ENST00000476932 SLC16A2P36021 539 aa23.4■■□□□ 1.34
LIMS2-214ENST00000476932 SLURP2P0DP57 97 aa23.4■■□□□ 1.34
LIMS2-214ENST00000476932 IDEP14735 1019 aa23.4■■□□□ 1.34
LIMS2-214ENST00000476932 USP14P54578 494 aa23.4■■□□□ 1.34
LIMS2-214ENST00000476932 TMC4Q7Z404 712 aa23.4■■□□□ 1.34
LIMS2-214ENST00000476932 FAM207AQ9NSI2 230 aaPredicted RBP23.4■■□□□ 1.34
LIMS2-214ENST00000476932 USP40Q9NVE5 1235 aa23.4■■□□□ 1.34
LIMS2-214ENST00000476932 ATP6V0A2Q9Y487 856 aa23.4■■□□□ 1.34
LIMS2-214ENST00000476932 ANO9A1A5B4 782 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 USP17L10C9JJH3 530 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 IPO7O95373 1038 aaKnown RBP23.39■■□□□ 1.34
LIMS2-214ENST00000476932 TUBBP07437 444 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 LRRC41Q15345 812 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 ZCWPW2Q504Y3 356 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 FOXR2Q6PJQ5 311 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 CUL5Q93034 780 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 COL11A2P13942 1736 aaPredicted RBP23.39■■□□□ 1.34
LIMS2-214ENST00000476932 ATAD5Q96QE3 1844 aa23.39■■□□□ 1.34
LIMS2-214ENST00000476932 ZBTB5O15062 677 aa23.39■■□□□ 1.33
LIMS2-214ENST00000476932 CDC42EP5Q6NZY7 148 aa23.39■■□□□ 1.33
LIMS2-214ENST00000476932 ATF5Q9Y2D1 282 aaPredicted RBP23.39■■□□□ 1.33
LIMS2-214ENST00000476932 MACROD2A1Z1Q3 448 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 SCNN1DP51172 638 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 GYS2P54840 703 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 COASYQ13057 564 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 PSMD2Q13200 908 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 GPATCH4Q5T3I0 446 aaKnown RBP23.38■■□□□ 1.33
LIMS2-214ENST00000476932 KCTD1Q719H9 257 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 SEPT12Q8IYM1 358 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 BAP1Q92560 729 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 CCDC42Q96M95 316 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 GBP3Q9H0R5 595 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 PDE2AO00408 941 aaPredicted RBP23.38■■□□□ 1.33
LIMS2-214ENST00000476932 LCA5LO95447 670 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 CASP8Q14790 479 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 HYIQ5T013 277 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 MEX3CQ5U5Q3 659 aaKnown RBP23.38■■□□□ 1.33
LIMS2-214ENST00000476932 C2CD5Q86YS7 1000 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 CAPZA3Q96KX2 299 aa23.38■■□□□ 1.33
LIMS2-214ENST00000476932 HOXA7P31268 230 aaPredicted RBP23.37■■□□□ 1.33
LIMS2-214ENST00000476932 CCDC96Q2M329 555 aa23.37■■□□□ 1.33
LIMS2-214ENST00000476932 LRRC27Q9C0I9 530 aa23.37■■□□□ 1.33
LIMS2-214ENST00000476932 ZNF185O15231 689 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 FGFR1OPO95684 399 aaKnown RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 KIF11P52732 1056 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 KIF5AQ12840 1032 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 NFIAQ12857 509 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 APOBEC3HQ6NTF7 200 aaKnown RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 SMCR8Q8TEV9 937 aaPredicted RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 SECISBP2LQ93073 1101 aaKnown RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 FGFBP2Q9BYJ0 223 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 TSGA10Q9BZW7 698 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 DNAJC18Q9H819 358 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 RNF216Q9NWF9 866 aaPredicted RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 CAPN6Q9Y6Q1 641 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 ZNF646O15015 1829 aaPredicted RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 CCDC66A2RUB6 948 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 LRRC53A6NM62 1247 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 N4BP1O75113 896 aaKnown RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 GCFC2P16383 781 aaKnown RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 MRPL12P52815 198 aaKnown RBP23.36■■□□□ 1.33
LIMS2-214ENST00000476932 NEK11Q8NG66 645 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 SH2D4AQ9H788 454 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 MMRN2Q9H8L6 949 aa23.36■■□□□ 1.33
LIMS2-214ENST00000476932 ERCC3P19447 782 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 EIF4A3P38919 411 aaKnown RBP23.35■■□□□ 1.33
LIMS2-214ENST00000476932 ATP2B2Q01814 1243 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 CKAP4Q07065 602 aaKnown RBP23.35■■□□□ 1.33
LIMS2-214ENST00000476932 SPA17Q15506 151 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 SLC27A3Q5K4L6 730 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 CCDC84Q86UT8 332 aaPredicted RBP23.35■■□□□ 1.33
LIMS2-214ENST00000476932 PROM2Q8N271 834 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 RPGRIP1Q96KN7 1286 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 IFIH1Q9BYX4 1025 aaKnown RBP23.35■■□□□ 1.33
LIMS2-214ENST00000476932 PSTPIP2Q9H939 334 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 PCDHA13Q9Y5I0 950 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 LRRIQ3A6PVS8 624 aaPredicted RBP23.35■■□□□ 1.33
LIMS2-214ENST00000476932 ZFPM1Q8IX07 1006 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 MYOCDQ8IZQ8 938 aa23.35■■□□□ 1.33
LIMS2-214ENST00000476932 CCDC155Q8N6L0 562 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms