RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 MICU3Q86XE3 530 aa24.71■■□□□ 1.55
LIMK1-204ENST00000476792 CCDC82Q8N4S0 544 aa24.71■■□□□ 1.55
LIMK1-204ENST00000476792 TMEM199Q8N511 208 aa24.71■■□□□ 1.55
LIMK1-204ENST00000476792 SAMD3Q8N6K7 520 aa24.71■■□□□ 1.55
LIMK1-204ENST00000476792 SEZ6LQ9BYH1 1024 aa24.71■■□□□ 1.55
LIMK1-204ENST00000476792 ALDH8A1Q9H2A2 487 aaPredicted RBP24.71■■□□□ 1.55
LIMK1-204ENST00000476792 TRMT13Q9NUP7 481 aaKnown RBP24.71■■□□□ 1.55
LIMK1-204ENST00000476792 DDX41Q9UJV9 622 aaKnown RBP24.71■■□□□ 1.55
LIMK1-204ENST00000476792 KIAA1217Q5T5P2 1943 aa24.71■■□□□ 1.55
LIMK1-204ENST00000476792 UMODL1Q5DID0 1318 aa24.7■■□□□ 1.54
LIMK1-204ENST00000476792 hCG_1642624A0A1W2PR95 340 aa24.7■■□□□ 1.54
LIMK1-204ENST00000476792 KPNA6O60684 536 aa24.7■■□□□ 1.54
LIMK1-204ENST00000476792 ACRP10323 421 aa24.7■■□□□ 1.54
LIMK1-204ENST00000476792 PPIGQ13427 754 aaKnown RBP eCLIP24.7■■□□□ 1.54
LIMK1-204ENST00000476792 NBPF20Q3BBV1 942 aa24.7■■□□□ 1.54
LIMK1-204ENST00000476792 ADCK5Q3MIX3 580 aa24.7■■□□□ 1.54
LIMK1-204ENST00000476792 MMP3P08254 477 aa24.69■■□□□ 1.54
LIMK1-204ENST00000476792 CCL23P55773 120 aa24.69■■□□□ 1.54
LIMK1-204ENST00000476792 SYNE3Q6ZMZ3 975 aa24.69■■□□□ 1.54
LIMK1-204ENST00000476792 VSIG10LQ86VR7 867 aa24.69■■□□□ 1.54
LIMK1-204ENST00000476792 FANCBQ8NB91 859 aa24.69■■□□□ 1.54
LIMK1-204ENST00000476792 FAM161BQ96MY7 647 aa24.69■■□□□ 1.54
LIMK1-204ENST00000476792 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.69■■□□□ 1.542e-7■■□□□ 14.2
LIMK1-204ENST00000476792 CYP2C9P11712 490 aa24.68■■□□□ 1.54
LIMK1-204ENST00000476792 SMARCA1P28370 1054 aa24.68■■□□□ 1.54
LIMK1-204ENST00000476792 CCND2P30279 289 aa24.68■■□□□ 1.54
LIMK1-204ENST00000476792 DHX32Q7L7V1 743 aaKnown RBP24.68■■□□□ 1.54
LIMK1-204ENST00000476792 NOC4LQ9BVI4 516 aaKnown RBP24.68■■□□□ 1.54
LIMK1-204ENST00000476792 SZT2Q5T011 3432 aa24.68■■□□□ 1.54
LIMK1-204ENST00000476792 RGS20O76081 388 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 USP17L6PQ6QN14 398 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 C16orf59Q7L2K0 433 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 SGMS1Q86VZ5 419 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 DHX37Q8IY37 1157 aaKnown RBP24.67■■□□□ 1.54
LIMK1-204ENST00000476792 SMARCC2Q8TAQ2 1214 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 CUL5Q93034 780 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 MTMR10Q9NXD2 777 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 LAMA3Q16787 3333 aa24.67■■□□□ 1.54
LIMK1-204ENST00000476792 EXOSC10Q01780 885 aaKnown RBP24.66■■□□□ 1.54
LIMK1-204ENST00000476792 KRT32Q14532 448 aa24.66■■□□□ 1.54
LIMK1-204ENST00000476792 TMTC3Q6ZXV5 915 aa24.66■■□□□ 1.54
LIMK1-204ENST00000476792 SCN10AQ9Y5Y9 1956 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 SUPT20HL2P0C7V6 817 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 CASTP20810 708 aaKnown RBP24.65■■□□□ 1.54
LIMK1-204ENST00000476792 LAMC2Q13753 1193 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 TSGA10IPQ3SY00 556 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 TMEM240Q5SV17 173 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 ZNF365Q70YC5 407 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 GPKOWQ92917 476 aaPredicted RBP eCLIP24.65■■□□□ 1.54
LIMK1-204ENST00000476792 BRPF3Q9ULD4 1205 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 NAP1L2Q9ULW6 460 aaPredicted RBP24.65■■□□□ 1.54
LIMK1-204ENST00000476792 MYH7BA7E2Y1 1941 aa24.65■■□□□ 1.54
LIMK1-204ENST00000476792 CPA1P15085 419 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 SMAD3P84022 425 aaKnown RBP24.64■■□□□ 1.54
LIMK1-204ENST00000476792 FGD1P98174 961 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 DGKDQ16760 1214 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 ZNF697Q5TEC3 545 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 NFRKBQ6P4R8 1299 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 APOA5Q6Q788 366 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 SCLYQ96I15 445 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 WNT8AQ9H1J5 351 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 IL23AQ9NPF7 189 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 RTEL1Q9NZ71 1219 aa24.64■■□□□ 1.54
LIMK1-204ENST00000476792 GGPS1O95749 300 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 SP2Q02086 613 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 KCNV1Q6PIU1 500 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 HEATR3Q7Z4Q2 680 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 KAT2BQ92831 832 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 SPATA33Q96N06 139 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 PSTPIP2Q9H939 334 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 NOD1Q9Y239 953 aa24.63■■□□□ 1.53
LIMK1-204ENST00000476792 KLF18A0A0U1RQI7 1052 aa24.62■■□□□ 1.53
LIMK1-204ENST00000476792 MEIS2O14770 477 aa24.62■■□□□ 1.53
LIMK1-204ENST00000476792 ZBTB43O43298 467 aa24.62■■□□□ 1.53
LIMK1-204ENST00000476792 ZNF286BP0CG31 522 aa24.62■■□□□ 1.53
LIMK1-204ENST00000476792 MRPS9P82933 396 aaKnown RBP24.62■■□□□ 1.53
LIMK1-204ENST00000476792 RTN1Q16799 776 aa24.62■■□□□ 1.53
LIMK1-204ENST00000476792 CELF3Q5SZQ8 465 aaKnown RBP24.62■■□□□ 1.53
LIMK1-204ENST00000476792 FAM109BQ6ICB4 259 aaPredicted RBP24.62■■□□□ 1.53
LIMK1-204ENST00000476792 PSRC1Q6PGN9 363 aaPredicted RBP24.62■■□□□ 1.53
LIMK1-204ENST00000476792 PPTC7Q8NI37 304 aa24.62■■□□□ 1.53
LIMK1-204ENST00000476792 EMID1Q96A84 441 aaPredicted RBP24.62■■□□□ 1.53
LIMK1-204ENST00000476792 JAKMIP1Q96N16 626 aaKnown RBP24.62■■□□□ 1.53
LIMK1-204ENST00000476792 ALG1Q9BT22 464 aa24.62■■□□□ 1.53
LIMK1-204ENST00000476792 UBA1P22314 1058 aaKnown RBP24.61■■□□□ 1.53
LIMK1-204ENST00000476792 PTPN11Q06124 597 aaPredicted RBP24.61■■□□□ 1.53
LIMK1-204ENST00000476792 MYSM1Q5VVJ2 828 aa24.61■■□□□ 1.53
LIMK1-204ENST00000476792 MLXIPQ9HAP2 919 aa24.61■■□□□ 1.53
LIMK1-204ENST00000476792 RBM28Q9NW13 759 aaKnown RBP24.61■■□□□ 1.53
LIMK1-204ENST00000476792 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.6■■□□□ 1.53
LIMK1-204ENST00000476792 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.6■■□□□ 1.53
LIMK1-204ENST00000476792 GOLGA8AA7E2F4 631 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 GOLGA8BA8MQT2 603 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 FGBP02675 491 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 HMGB1P09429 215 aaKnown RBP24.6■■□□□ 1.53
LIMK1-204ENST00000476792 HSPA4P34932 840 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 PSEN2P49810 448 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 PTGISQ16647 500 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 UBE2SQ16763 222 aa24.6■■□□□ 1.53
LIMK1-204ENST00000476792 GNPTABQ3T906 1256 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms