RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 COG2Q14746 738 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 TKFCQ3LXA3 575 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 Q4G0T1 1027 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 RRAGBQ5VZM2 374 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 CPXCR1Q8N123 301 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 IGSF22Q8N9C0 903 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 CRYGNQ8WXF5 182 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 ATG4CQ96DT6 458 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 AGBL1Q96MI9 1066 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 PANK2Q9BZ23 570 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 MAF1Q9H063 256 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 RAVER2Q9HCJ3 691 aaKnown RBP13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 LRWD1Q9UFC0 647 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 STK24Q9Y6E0 443 aa13.97□□□□□ -0.17
CDKAL1-203ENST00000476517 WDR81Q562E7 1941 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 A0A087X0B3 334 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 UNCXA6NJT0 531 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 MYL1P05976 194 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 CIITAP33076 1130 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 TPM4P67936 248 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 PPIL2Q13356 520 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 PDIA5Q14554 519 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 KARSQ15046 597 aaKnown RBP13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 E2F4Q16254 413 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 KRT79Q5XKE5 535 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 CATSPERGQ6ZRH7 1159 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 BPIFA3Q9BQP9 254 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 TTC12Q9H892 705 aaPredicted RBP13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 CBX8Q9HC52 389 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 HOXC10Q9NYD6 342 aa13.96□□□□□ -0.17
CDKAL1-203ENST00000476517 BECN2A8MW95 431 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 CXCL11O14625 94 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 GTPBP6O43824 516 aaPredicted RBP13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 PRR16Q569H4 304 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 HAUS3Q68CZ6 603 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 GADL1Q6ZQY3 521 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 PAGE5Q96GU1 130 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 FAM20AQ96MK3 541 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 KCNMB3Q9NPA1 279 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 RNF146Q9NTX7 359 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 PCDHA12Q9UN75 941 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 ADAMTS5Q9UNA0 930 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 PCDHA5Q9Y5H7 936 aa13.95□□□□□ -0.18
CDKAL1-203ENST00000476517 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 A0A0G2JLL6 359 aaPredicted RBP13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 BIN1O00499 593 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 EDIL3O43854 480 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 AFMP43652 599 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 MDM2Q00987 491 aaPredicted RBP13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 DPCR1Q3MIW9 517 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 NT5DC1Q5TFE4 455 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 SNRNP48Q6IEG0 339 aaKnown RBP13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 C11orf57Q6ZUT1 292 aaPredicted RBP13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 SH3RF1Q7Z6J0 888 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 PRRT2Q7Z6L0 340 aaPredicted RBP13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 MB21D1Q8N884 522 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 ERMNQ8TAM6 284 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 CLEC4DQ8WXI8 215 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 GSDMAQ96QA5 445 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 BEGAINQ9BUH8 593 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 TEX13BQ9BXU2 312 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 HOMER2Q9NSB8 354 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 MAN1B1Q9UKM7 699 aa13.94□□□□□ -0.18
CDKAL1-203ENST00000476517 RPTORQ8N122 1335 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 MYH11P35749 1972 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 POTEMA6NI47 508 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 SMTNL1A8MU46 457 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 NFIBO00712 420 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 PLCG1P19174 1290 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 FKBP1BP68106 108 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 AMPD3Q01432 767 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 DLK2Q6UY11 383 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 RNF207Q6ZRF8 634 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 FASTKD5Q7L8L6 764 aaKnown RBP13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 LUZP1Q86V48 1076 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 REPS2Q8NFH8 660 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 HAS1Q92839 578 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 P2RX7Q99572 595 aaKnown RBP13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 LRRC27Q9C0I9 530 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 NT5C3AQ9H0P0 336 aa13.93□□□□□ -0.18
CDKAL1-203ENST00000476517 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms