RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CDH23Q9H251 3354 aa18.75■□□□□ 0.59
COL1A1-205ENST00000476387 UMODL1Q5DID0 1318 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 OPLAHO14841 1288 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 FGBP02675 491 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 GNAQP50148 359 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 PTPN11Q06124 597 aaPredicted RBP18.74■□□□□ 0.59
COL1A1-205ENST00000476387 NBPF20Q3BBV1 942 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 TSGA10IPQ3SY00 556 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 ARHGEF16Q5VV41 709 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 RPUSD2Q8IZ73 545 aaKnown RBP18.74■□□□□ 0.59
COL1A1-205ENST00000476387 TIFAQ96CG3 184 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 PIGSQ96S52 555 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 WNT8AQ9H1J5 351 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 TRMT13Q9NUP7 481 aaKnown RBP18.74■□□□□ 0.59
COL1A1-205ENST00000476387 PCDHA1Q9Y5I3 950 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
COL1A1-205ENST00000476387 DLL1O00548 723 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 EIF3JO75822 258 aaKnown RBP18.73■□□□□ 0.59
COL1A1-205ENST00000476387 CFBP00751 764 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 GH1P01241 217 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 HMGB1P09429 215 aaKnown RBP18.73■□□□□ 0.59
COL1A1-205ENST00000476387 CCL23P55773 120 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 COL9A3Q14050 684 aaPredicted RBP18.73■□□□□ 0.59
COL1A1-205ENST00000476387 SYNE3Q6ZMZ3 975 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 RASEFQ8IZ41 740 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 MYLIPQ8WY64 445 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 SPZ1Q9BXG8 430 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 PXMP2Q9NR77 195 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 UNC80Q8N2C7 3258 aa18.73■□□□□ 0.59
COL1A1-205ENST00000476387 PNMA6FA0A0J9YX94 578 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 CYTH3O43739 400 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 PPP1R11O60927 126 aaPredicted RBP18.72■□□□□ 0.59
COL1A1-205ENST00000476387 NR3C2P08235 984 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 PFKMP08237 780 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 FOSL2P15408 326 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 EIF2AK2P19525 551 aaKnown RBP18.72■□□□□ 0.59
COL1A1-205ENST00000476387 ARHGAP1Q07960 439 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 SEPT14Q6ZU15 432 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 DHX32Q7L7V1 743 aaKnown RBP18.72■□□□□ 0.59
COL1A1-205ENST00000476387 MAFAQ8NHW3 353 aaPredicted RBP18.72■□□□□ 0.59
COL1A1-205ENST00000476387 LZTS2Q9BRK4 669 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 ZNF576Q9H609 170 aa18.72■□□□□ 0.59
COL1A1-205ENST00000476387 SEC63Q9UGP8 760 aaKnown RBP18.72■□□□□ 0.59
COL1A1-205ENST00000476387 MMP3P08254 477 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 CYP2C9P11712 490 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 RXRAP19793 462 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 FGD1P98174 961 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 RAB30Q15771 203 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 LY6KQ17RY6 165 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 SLC35G1Q2M3R5 365 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 ADCK5Q3MIX3 580 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 FAM47CQ5HY64 1035 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 SGMS1Q86VZ5 419 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.71■□□□□ 0.59
COL1A1-205ENST00000476387 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 PIBF1Q8WXW3 757 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 EMID1Q96A84 441 aaPredicted RBP18.71■□□□□ 0.59
COL1A1-205ENST00000476387 RRP36Q96EU6 259 aaKnown RBP18.71■□□□□ 0.59
COL1A1-205ENST00000476387 TCEANC2Q96MN5 208 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 PBX4Q9BYU1 374 aa18.71■□□□□ 0.59
COL1A1-205ENST00000476387 PITPNM1O00562 1244 aa18.7■□□□□ 0.58
COL1A1-205ENST00000476387 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
COL1A1-205ENST00000476387 HSPA4P34932 840 aa18.7■□□□□ 0.58
COL1A1-205ENST00000476387 GRIN2CQ14957 1233 aa18.7■□□□□ 0.58
COL1A1-205ENST00000476387 RAB11FIP4Q86YS3 637 aa18.7■□□□□ 0.58
COL1A1-205ENST00000476387 JAKMIP1Q96N16 626 aaKnown RBP18.7■□□□□ 0.58
COL1A1-205ENST00000476387 PDCD2LQ9BRP1 358 aa18.7■□□□□ 0.58
COL1A1-205ENST00000476387 CXXC1Q9P0U4 656 aaPredicted RBP18.7■□□□□ 0.58
COL1A1-205ENST00000476387 DDX41Q9UJV9 622 aaKnown RBP18.7■□□□□ 0.58
COL1A1-205ENST00000476387 EYSQ5T1H1 3165 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 GRXCR1A8MXD5 290 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 PLEKHA8P1O95397 391 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
COL1A1-205ENST00000476387 RFC2P35250 354 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 EXOSC10Q01780 885 aaKnown RBP18.69■□□□□ 0.58
COL1A1-205ENST00000476387 DGKDQ16760 1214 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 KCNV1Q6PIU1 500 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 OTOP2Q7RTS6 562 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 SESTD1Q86VW0 696 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 PPTC7Q8NI37 304 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 VWCEQ96DN2 955 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 SCLYQ96I15 445 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 MSRAQ9UJ68 235 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 MRVI1Q9Y6F6 885 aa18.69■□□□□ 0.58
COL1A1-205ENST00000476387 PRUNE2Q8WUY3 3088 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 GCOM1H8Y6P7 765 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-205ENST00000476387 POLR2MP0CAP2 368 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 PBX2P40425 430 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 BFSP2Q13515 415 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 LAMC2Q13753 1193 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 APOA5Q6Q788 366 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 BLOC1S2Q6QNY1 142 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 VSIG10LQ86VR7 867 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 FANCBQ8NB91 859 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 KCNB2Q92953 911 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 SNX14Q9Y5W7 946 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 CHD9Q3L8U1 2897 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
COL1A1-205ENST00000476387 MYO9BQ13459 2157 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms