RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 ABCB11O95342 1321 aa12.78□□□□□ -0.36
LSG1-207ENST00000475763 TRPM7Q96QT4 1865 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 A0A0G2JLL6 359 aaPredicted RBP12.77□□□□□ -0.37
LSG1-207ENST00000475763 PIK3CDO00329 1044 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 ZBED4O75132 1171 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 FOSP01100 380 aaPredicted RBP12.77□□□□□ -0.37
LSG1-207ENST00000475763 OAZ1P54368 228 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 AP3B2Q13367 1082 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 CATSPERGQ6ZRH7 1159 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 PRRT2Q7Z6L0 340 aaPredicted RBP12.77□□□□□ -0.37
LSG1-207ENST00000475763 SAMD3Q8N6K7 520 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 ADAMTS5Q9UNA0 930 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 PCDHB6Q9Y5E3 794 aa12.77□□□□□ -0.37
LSG1-207ENST00000475763 TRAF5O00463 557 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 ADAMTS3O15072 1205 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
LSG1-207ENST00000475763 COG2Q14746 738 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 C2orf69Q8N8R5 385 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 RASGRP4Q8TDF6 673 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 NAP1L4Q99733 375 aaKnown RBP12.76□□□□□ -0.37
LSG1-207ENST00000475763 MAF1Q9H063 256 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 GBA2Q9HCG7 927 aaPredicted RBP12.76□□□□□ -0.37
LSG1-207ENST00000475763 HOXC10Q9NYD6 342 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 PCDHA7Q9UN72 937 aa12.76□□□□□ -0.37
LSG1-207ENST00000475763 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
LSG1-207ENST00000475763 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 LAD1O00515 517 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 VWA5AO00534 786 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 ATP2A1O14983 1001 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 ZNF536O15090 1300 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 CUTAO60888 179 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 SNAP25P60880 206 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 ATP2C1P98194 919 aaPredicted RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 GHRHRQ02643 423 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 DGKZQ13574 1117 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 INF2Q27J81 1249 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 USH1GQ495M9 461 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 NOM1Q5C9Z4 860 aaKnown RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 AXDND1Q5T1B0 1012 aaPredicted RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 JAKMIP3Q5VZ66 844 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 MOB2Q70IA6 237 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
LSG1-207ENST00000475763 FASTKD5Q7L8L6 764 aaKnown RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 RBBP6Q7Z6E9 1792 aaKnown RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 HLA-CQ95604 372 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 FERMT2Q96AC1 680 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 OPTNQ96CV9 577 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 SLC10A4Q96EP9 437 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 MAP3K20Q9NYL2 800 aaKnown RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 BIN2Q9UBW5 565 aaPredicted RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 CCPG1Q9ULG6 757 aa12.75□□□□□ -0.37
LSG1-207ENST00000475763 SRPRBQ9Y5M8 271 aaKnown RBP12.75□□□□□ -0.37
LSG1-207ENST00000475763 COL11A1P12107 1806 aaPredicted RBP12.74□□□□□ -0.37
LSG1-207ENST00000475763 MEIS2O14770 477 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
LSG1-207ENST00000475763 ATP2B1P20020 1258 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 CMA1P23946 247 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 PABPC4Q13310 644 aaKnown RBP eCLIP12.74□□□□□ -0.37
LSG1-207ENST00000475763 PKDCCQ504Y2 493 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 ARL6IP4Q66PJ3 421 aaKnown RBP12.74□□□□□ -0.37
LSG1-207ENST00000475763 MCF2L2Q86YR7 1114 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 MB21D1Q8N884 522 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 TBCKQ8TEA7 893 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 MRPS27Q92552 414 aaKnown RBP12.74□□□□□ -0.37
LSG1-207ENST00000475763 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 A0A0G2JMZ2 1700 aa12.74□□□□□ -0.37
LSG1-207ENST00000475763 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 GCOM1H8Y6P7 765 aaPredicted RBP12.73□□□□□ -0.37
LSG1-207ENST00000475763 OPLAHO14841 1288 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 CELF2O95319 508 aaKnown RBP12.73□□□□□ -0.37
LSG1-207ENST00000475763 POLR2MP0CAP2 368 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
LSG1-207ENST00000475763 PRPHP41219 470 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 USP11P51784 963 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 FOXC1Q12948 553 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 SNAPC2Q13487 334 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 ZNF174Q15697 407 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 UBE2SQ16763 222 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 PPP4R3AQ6IN85 833 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
LSG1-207ENST00000475763 MOXD1Q6UVY6 613 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 LBX2Q6XYB7 198 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 CCDC73Q6ZRK6 1079 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 CCAR1Q8IX12 1150 aaKnown RBP12.73□□□□□ -0.37
LSG1-207ENST00000475763 REPS2Q8NFH8 660 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 EHMT1Q9H9B1 1298 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 ZNF408Q9H9D4 720 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 DDX19AQ9NUU7 478 aaKnown RBP12.73□□□□□ -0.37
LSG1-207ENST00000475763 TMEM260Q9NX78 707 aa12.73□□□□□ -0.37
LSG1-207ENST00000475763 FBXO2Q9UK22 296 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms