RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
FAM3A-218ENST00000475657 SMAD2Q15796 467 aaKnown RBP16.48■□□□□ 0.23
FAM3A-218ENST00000475657 TCEAL5Q5H9L2 206 aa16.48■□□□□ 0.23
FAM3A-218ENST00000475657 DNERQ8NFT8 737 aa16.48■□□□□ 0.23
FAM3A-218ENST00000475657 APPBP2Q92624 585 aa16.48■□□□□ 0.23
FAM3A-218ENST00000475657 EDAQ92838 391 aa16.48■□□□□ 0.23
FAM3A-218ENST00000475657 COPS5Q92905 334 aa16.48■□□□□ 0.23
FAM3A-218ENST00000475657 OSBP2Q969R2 916 aa16.48■□□□□ 0.23
FAM3A-218ENST00000475657 NSUN3Q9H649 340 aaKnown RBP16.48■□□□□ 0.23
FAM3A-218ENST00000475657 GTF2IRD1Q9UHL9 959 aa16.48■□□□□ 0.23
FAM3A-218ENST00000475657 MYH7P12883 1935 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 LGR5O75473 907 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 AMHP03971 560 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 PTK7Q13308 1070 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 CTC1Q2NKJ3 1217 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 FAM117BQ6P1L5 589 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 CCDC62Q6P9F0 684 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 TRAF7Q6Q0C0 670 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 BTNL9Q6UXG8 535 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 KAT2BQ92831 832 aa16.47■□□□□ 0.23
FAM3A-218ENST00000475657 CHMP4BQ9H444 224 aaKnown RBP16.47■□□□□ 0.23
FAM3A-218ENST00000475657 MYO7AQ13402 2215 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 PTPDC1A2A3K4 754 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 PATL2C9JE40 543 aaKnown RBP16.46■□□□□ 0.23
FAM3A-218ENST00000475657 GPAA1O43292 621 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
FAM3A-218ENST00000475657 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
FAM3A-218ENST00000475657 LTBRP36941 435 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 GPM6BQ13491 265 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 TRIM71Q2Q1W2 868 aaKnown RBP16.46■□□□□ 0.23
FAM3A-218ENST00000475657 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.46■□□□□ 0.23
FAM3A-218ENST00000475657 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 RNF135Q8IUD6 432 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 AFG1LQ8WV93 481 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 CLEC4DQ8WXI8 215 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 MUTYHQ9UIF7 546 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
FAM3A-218ENST00000475657 EMSYQ7Z589 1322 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 ZFYP08048 801 aaPredicted RBP16.45■□□□□ 0.22
FAM3A-218ENST00000475657 MMP3P08254 477 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 CALML3P27482 149 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 NOVP48745 357 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 CHMP4BP1P59074 171 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 IRX6P78412 446 aaPredicted RBP16.45■□□□□ 0.22
FAM3A-218ENST00000475657 MBTPS1Q14703 1052 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 IER5LQ5T953 404 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 SLC30A10Q6XR72 485 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 IFNL3Q8IZI9 196 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 KBTBD3Q8NAB2 608 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 DCAF4Q8WV16 495 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 NACAP1Q9BZK3 213 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 CLDND1Q9NY35 253 aa16.45■□□□□ 0.22
FAM3A-218ENST00000475657 RIF1Q5UIP0 2472 aaKnown RBP16.44■□□□□ 0.22
FAM3A-218ENST00000475657 ARIH2O95376 493 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 GH1P01241 217 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 APPP05067 770 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 RPS6P62753 249 aaKnown RBP16.44■□□□□ 0.22
FAM3A-218ENST00000475657 TCF15Q12870 199 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 AAMPQ13685 434 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 TSHZ3Q63HK5 1081 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 EP400NLQ6ZTU2 488 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 TMEM192Q8IY95 271 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 MYOCDQ8IZQ8 938 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 KATNAL1Q9BW62 490 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 LRRCC1Q9C099 1032 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 MAF1Q9H063 256 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 IRF2BPLQ9H1B7 796 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 HDAC6Q9UBN7 1215 aa16.44■□□□□ 0.22
FAM3A-218ENST00000475657 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
FAM3A-218ENST00000475657 MBTPS2O43462 519 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 GFRA3O60609 400 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 ARHGAP1Q07960 439 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 DGKDQ16760 1214 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 ZNF618Q5T7W0 954 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 RPAINQ86UA6 219 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 RGS22Q8NE09 1264 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 DBF4BQ8NFT6 615 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 TOP1MTQ969P6 601 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 PBXIP1Q96AQ6 731 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 COL4A6Q14031 1691 aa16.43■□□□□ 0.22
FAM3A-218ENST00000475657 TMEM221A6NGB7 291 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 M0R296 226 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 HAS3O00219 553 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 SMAD4Q13485 552 aaKnown RBP16.42■□□□□ 0.22
FAM3A-218ENST00000475657 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 SYDE2Q5VT97 1194 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
FAM3A-218ENST00000475657 EMID1Q96A84 441 aaPredicted RBP16.42■□□□□ 0.22
FAM3A-218ENST00000475657 YME1L1Q96TA2 773 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 LMAN2LQ9H0V9 348 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 C5orf42Q9H799 3197 aa16.42■□□□□ 0.22
FAM3A-218ENST00000475657 MICAL3Q7RTP6 2002 aa16.41■□□□□ 0.22
FAM3A-218ENST00000475657 C5orf67F2Z3F1 127 aa16.41■□□□□ 0.22
FAM3A-218ENST00000475657 F2P00734 622 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms