RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 NSMFQ6X4W1 530 aa16.66■□□□□ 0.26
ATG9A-220ENST00000475339 LRRC47Q8N1G4 583 aaKnown RBP16.66■□□□□ 0.26
ATG9A-220ENST00000475339 COPS5Q92905 334 aa16.66■□□□□ 0.26
ATG9A-220ENST00000475339 ISY1Q9ULR0 285 aaKnown RBP16.66■□□□□ 0.26
ATG9A-220ENST00000475339 VPS13AQ96RL7 3174 aa16.66■□□□□ 0.26
ATG9A-220ENST00000475339 RAD50Q92878 1312 aa16.66■□□□□ 0.26
ATG9A-220ENST00000475339 LOC730098B7Z3J9 87 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 TMEM232C9JQI7 657 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 GOLIM4O00461 696 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 LINC01565O15544 149 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 AMHP03971 560 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 FDX1P10109 184 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 SNAP25P60880 206 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 RBL2Q08999 1139 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 MBTPS1Q14703 1052 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 YME1L1Q96TA2 773 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 BOLA2Q9H3K6 86 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 IGFLR1Q9H665 355 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 ECHDC1Q9NTX5 307 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 DNAH14Q0VDD8 3507 aa16.65■□□□□ 0.26
ATG9A-220ENST00000475339 GREB1LQ9C091 1923 aaPredicted RBP16.64■□□□□ 0.26
ATG9A-220ENST00000475339 MICAL3Q7RTP6 2002 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 EP300Q09472 2414 aaPredicted RBP16.64■□□□□ 0.25
ATG9A-220ENST00000475339 LGR5O75473 907 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 BMP3P12645 472 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 ATP5JP18859 108 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 NBL1P41271 181 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 PPP2R5BQ15173 497 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 ANKRD45Q5TZF3 282 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 TRAF7Q6Q0C0 670 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 ADSSL1Q8N142 457 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
ATG9A-220ENST00000475339 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
ATG9A-220ENST00000475339 CSPG5O95196 566 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 PDGFBP01127 241 aaPredicted RBP16.63■□□□□ 0.25
ATG9A-220ENST00000475339 ALDH5A1P51649 535 aaPredicted RBP16.63■□□□□ 0.25
ATG9A-220ENST00000475339 STAT2P52630 851 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 ZNF618Q5T7W0 954 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 SLFN13Q68D06 897 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 SESTD1Q86VW0 696 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 MKL1Q969V6 931 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 MKNK2Q9HBH9 465 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 ADD3Q9UEY8 706 aaKnown RBP16.63■□□□□ 0.25
ATG9A-220ENST00000475339 SLC4A4Q9Y6R1 1079 aa16.63■□□□□ 0.25
ATG9A-220ENST00000475339 LCTP09848 1927 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 NKRFO15226 690 aaKnown RBP eCLIP16.62■□□□□ 0.25
ATG9A-220ENST00000475339 GRM6O15303 877 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 UPP2O95045 317 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 EYA4O95677 639 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 CHGBP05060 677 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 IKQ13123 557 aaPredicted RBP16.62■□□□□ 0.25
ATG9A-220ENST00000475339 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
ATG9A-220ENST00000475339 CBX2Q14781 532 aaPredicted RBP16.62■□□□□ 0.25
ATG9A-220ENST00000475339 GMCL1P1Q8NEA9 526 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 WNT8BQ93098 351 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 NKD2Q969F2 451 aaPredicted RBP16.62■□□□□ 0.25
ATG9A-220ENST00000475339 CEP95Q96GE4 821 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 HAUS7Q99871 368 aa16.62■□□□□ 0.25
ATG9A-220ENST00000475339 ADD2P35612 726 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 NDUFV1P49821 464 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 NUBP1P53384 320 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 ADAM15Q13444 863 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 FRMD5Q7Z6J6 570 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 CHURC1Q8WUH1 139 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 KAT2BQ92831 832 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 MSLNLQ96KJ4 702 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATG9A-220ENST00000475339 GTF2IRD1Q9UHL9 959 aa16.61■□□□□ 0.25
ATG9A-220ENST00000475339 KMT2BQ9UMN6 2715 aaPredicted RBP16.61■□□□□ 0.25
ATG9A-220ENST00000475339 ZFHX4Q86UP3 3567 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
ATG9A-220ENST00000475339 CTNNB1P35222 781 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 TRIM71Q2Q1W2 868 aaKnown RBP16.6■□□□□ 0.25
ATG9A-220ENST00000475339 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 FAM160B2Q86V87 743 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 SCFD2Q8WU76 684 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 AFG1LQ8WV93 481 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 TOP1MTQ969P6 601 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 RPGRIP1Q96KN7 1286 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 INCENPQ9NQS7 918 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 HDAC6Q9UBN7 1215 aa16.6■□□□□ 0.25
ATG9A-220ENST00000475339 ATG2AQ2TAZ0 1938 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 MYH4Q9Y623 1939 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 TTLL1O95922 423 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 MX1P20591 662 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 PDE4BQ07343 736 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 CNTNAP3BQ96NU0 1288 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 CNTNAP3Q9BZ76 1288 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 LMAN2LQ9H0V9 348 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 CLEC1BQ9P126 229 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
ATG9A-220ENST00000475339 CCPG1Q9ULG6 757 aa16.59■□□□□ 0.25
ATG9A-220ENST00000475339 TTC41PQ6P2S7 1318 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms