RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 GSDMAQ96QA5 445 aa11.51□□□□□ -0.57
PCCB-213ENST00000475214 TTC12Q9H892 705 aaPredicted RBP11.51□□□□□ -0.57
PCCB-213ENST00000475214 SLC38A10Q9HBR0 1119 aa11.51□□□□□ -0.57
PCCB-213ENST00000475214 MAN1B1Q9UKM7 699 aa11.51□□□□□ -0.57
PCCB-213ENST00000475214 PCDHA12Q9UN75 941 aa11.51□□□□□ -0.57
PCCB-213ENST00000475214 FZD1Q9UP38 647 aa11.51□□□□□ -0.57
PCCB-213ENST00000475214 CSADQ9Y600 493 aa11.51□□□□□ -0.57
PCCB-213ENST00000475214 A0A087WWV3 80 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 PP2D1A8MPX8 630 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 TBX3O15119 743 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 TRPA1O75762 1119 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 MYL1P05976 194 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 TAL1P17542 331 aaPredicted RBP11.5□□□□□ -0.57
PCCB-213ENST00000475214 CIITAP33076 1130 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 HMGCS2P54868 508 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 DPYDQ12882 1025 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 Q4G0T1 1027 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 KRT79Q5XKE5 535 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 GRAMD1CQ8IYS0 662 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 CPXCR1Q8N123 301 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 MLKLQ8NB16 471 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 SPATA20Q8TB22 786 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 CRYGNQ8WXF5 182 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 CDK5RAP3Q96JB5 506 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 RNF186Q9NXI6 227 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 MAP3K20Q9NYL2 800 aaKnown RBP11.5□□□□□ -0.57
PCCB-213ENST00000475214 RABGAP1Q9Y3P9 1069 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 AFG3L2Q9Y4W6 797 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 ZNF536O15090 1300 aa11.5□□□□□ -0.57
PCCB-213ENST00000475214 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 IKBKBO14920 756 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 SLC26A4O43511 780 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 ALAS1P13196 640 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 INHBEP58166 350 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 AMPD3Q01432 767 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 VGLL4Q14135 290 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 MORC3Q14149 939 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 COG2Q14746 738 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 PRR16Q569H4 304 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 CT47A1Q5JQC4 288 aaPredicted RBP11.49□□□□□ -0.57
PCCB-213ENST00000475214 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.49□□□□□ -0.57
PCCB-213ENST00000475214 DHX40Q8IX18 779 aaKnown RBP11.49□□□□□ -0.57
PCCB-213ENST00000475214 HAS1Q92839 578 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 P2RX7Q99572 595 aaKnown RBP11.49□□□□□ -0.57
PCCB-213ENST00000475214 RAVER2Q9HCJ3 691 aaKnown RBP11.49□□□□□ -0.57
PCCB-213ENST00000475214 KCNMB3Q9NPA1 279 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 RMND1Q9NWS8 449 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 SNCAIPQ9Y6H5 919 aa11.49□□□□□ -0.57
PCCB-213ENST00000475214 VWA5AO00534 786 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 PTMAP06454 111 aaKnown RBP11.48□□□□□ -0.57
PCCB-213ENST00000475214 PLCG1P19174 1290 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 DSG3P32926 999 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 HSD17B4P51659 736 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 OAZ1P54368 228 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 CATSPERGQ6ZRH7 1159 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 ANKRD13AQ8IZ07 590 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 TBC1D5Q92609 795 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 STAMQ92783 540 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 CCDC47Q96A33 483 aaKnown RBP11.48□□□□□ -0.57
PCCB-213ENST00000475214 SLC10A4Q96EP9 437 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 FAM20AQ96MK3 541 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 PLIN2Q99541 437 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 TRIM5Q9C035 493 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 LRRC27Q9C0I9 530 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 MYPNQ86TC9 1320 aa11.48□□□□□ -0.57
PCCB-213ENST00000475214 KDM3AQ9Y4C1 1321 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 ALDH1A1P00352 501 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 RPN1P04843 607 aaKnown RBP11.47□□□□□ -0.57
PCCB-213ENST00000475214 TM4SF4P48230 202 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 MYL5Q02045 173 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 GHRHRQ02643 423 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 PPATQ06203 517 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 HS1BP3Q53T59 392 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 NAALADL2Q58DX5 795 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 LDLRAD1Q5T700 205 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 SARM1Q6SZW1 724 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 SV2BQ7L1I2 683 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 ERMNQ8TAM6 284 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 CLEC4DQ8WXI8 215 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 ATG4CQ96DT6 458 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 MMTAG2Q9BU76 263 aaKnown RBP11.47□□□□□ -0.57
PCCB-213ENST00000475214 NT5C3AQ9H0P0 336 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 BLZF1Q9H2G9 400 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 KBTBD4Q9NVX7 518 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
PCCB-213ENST00000475214 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
PCCB-213ENST00000475214 POTEMA6NI47 508 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 GOLGA6L6A8MZA4 724 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 FAM86B1E9PN63 330 aa11.46□□□□□ -0.57
PCCB-213ENST00000475214 AP5Z1O43299 807 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms