RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 TMTC3Q6ZXV5 915 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 DHX32Q7L7V1 743 aaKnown RBP15.73■□□□□ 0.11
SPCS1-204ENST00000474945 CCDC82Q8N4S0 544 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
SPCS1-204ENST00000474945 SAMD3Q8N6K7 520 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 SLC43A3Q8NBI5 491 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 CUL5Q93034 780 aa15.73■□□□□ 0.11
SPCS1-204ENST00000474945 RNPC3Q96LT9 517 aaKnown RBP15.73■□□□□ 0.11
SPCS1-204ENST00000474945 NAP1L2Q9ULW6 460 aaPredicted RBP15.73■□□□□ 0.11
SPCS1-204ENST00000474945 GRIN2DO15399 1336 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 hCG_1642624A0A1W2PR95 340 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 B4GALT4O60513 344 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 TIMP1P01033 207 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 MMP3P08254 477 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 SMARCA1P28370 1054 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 ARHGAP1Q07960 439 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 SHHQ15465 462 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 CCDC62Q6P9F0 684 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 SMARCC2Q8TAQ2 1214 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 AFG1LQ8WV93 481 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 JAKMIP1Q96N16 626 aaKnown RBP15.72■□□□□ 0.11
SPCS1-204ENST00000474945 SEZ6LQ9BYH1 1024 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 TRPV6Q9H1D0 765 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 HIPK3Q9H422 1215 aa15.72■□□□□ 0.11
SPCS1-204ENST00000474945 KLF18A0A0U1RQI7 1052 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 A6NJR5 290 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 GOLGA8AA7E2F4 631 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 GOLGA8BA8MQT2 603 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 ZBTB43O43298 467 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 SORBS3O60504 671 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 KPNA6O60684 536 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 CD4P01730 458 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.11
SPCS1-204ENST00000474945 HMGB1P09429 215 aaKnown RBP15.71■□□□□ 0.11
SPCS1-204ENST00000474945 EPHB4P54760 987 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 RTN1Q16799 776 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 TSGA10IPQ3SY00 556 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 MFSD5Q6N075 450 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 HEATR3Q7Z4Q2 680 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 FANCBQ8NB91 859 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 PPP1R13LQ8WUF5 828 aa15.71■□□□□ 0.11
SPCS1-204ENST00000474945 ALDH8A1Q9H2A2 487 aaPredicted RBP15.71■□□□□ 0.11
SPCS1-204ENST00000474945 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
SPCS1-204ENST00000474945 RBM28Q9NW13 759 aaKnown RBP15.71■□□□□ 0.11
SPCS1-204ENST00000474945 DDX41Q9UJV9 622 aaKnown RBP15.71■□□□□ 0.11
SPCS1-204ENST00000474945 FRMPD4Q14CM0 1322 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 CNTNAP5Q8WYK1 1306 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 KIAA1217Q5T5P2 1943 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 CPA1P15085 419 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 CYP2C18P33260 490 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 HSPA4P34932 840 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 EXOSC10Q01780 885 aaKnown RBP15.7■□□□□ 0.1
SPCS1-204ENST00000474945 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.1
SPCS1-204ENST00000474945 USP17L6PQ6QN14 398 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 TMEM199Q8N511 208 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.1
SPCS1-204ENST00000474945 ZFP91Q96JP5 570 aaPredicted RBP15.7■□□□□ 0.1
SPCS1-204ENST00000474945 PPP4R2Q9NY27 417 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
SPCS1-204ENST00000474945 ZNF286BP0CG31 522 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 CSF2RAP15509 400 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 UBA1P22314 1058 aaKnown RBP15.69■□□□□ 0.1
SPCS1-204ENST00000474945 NBPF20Q3BBV1 942 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 GNPTABQ3T906 1256 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 BLOC1S2Q6QNY1 142 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 Q7L0L9 218 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 VSIG10LQ86VR7 867 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 DHX37Q8IY37 1157 aaKnown RBP15.69■□□□□ 0.1
SPCS1-204ENST00000474945 DEFB123Q8N688 67 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 EMID1Q96A84 441 aaPredicted RBP15.69■□□□□ 0.1
SPCS1-204ENST00000474945 NOC4LQ9BVI4 516 aaKnown RBP15.69■□□□□ 0.1
SPCS1-204ENST00000474945 NOD1Q9Y239 953 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 SNX14Q9Y5W7 946 aa15.69■□□□□ 0.1
SPCS1-204ENST00000474945 UMODL1Q5DID0 1318 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 SCN10AQ9Y5Y9 1956 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 RGS20O76081 388 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 GGPS1O95749 300 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 CASTP20810 708 aaKnown RBP15.68■□□□□ 0.1
SPCS1-204ENST00000474945 LAMC2Q13753 1193 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 DGKDQ16760 1214 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 GPR153Q6NV75 609 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 PSRC1Q6PGN9 363 aaPredicted RBP15.68■□□□□ 0.1
SPCS1-204ENST00000474945 KCNV1Q6PIU1 500 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 PPTC7Q8NI37 304 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 SPATA33Q96N06 139 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 PSTPIP2Q9H939 334 aa15.68■□□□□ 0.1
SPCS1-204ENST00000474945 PIK3CDO00329 1044 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 SUPT20HL2P0C7V6 817 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 CYP2C9P11712 490 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.1
SPCS1-204ENST00000474945 NAPAP54920 295 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 CCL23P55773 120 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 UBE2SQ16763 222 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 WWC2Q6AWC2 1192 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 NFRKBQ6P4R8 1299 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 Q6ZUG5 572 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 KCNB2Q92953 911 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 BRF1Q92994 677 aa15.67■□□□□ 0.1
SPCS1-204ENST00000474945 SPDYE3A6NKU9 549 aa15.66■□□□□ 0.1
SPCS1-204ENST00000474945 MEIS2O14770 477 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms