RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 IKBKEQ14164 716 aa16.11■□□□□ 0.17
EPCAM-205ENST00000474691 CNKSR3Q6P9H4 555 aa16.11■□□□□ 0.17
EPCAM-205ENST00000474691 ZNF589Q86UQ0 364 aaPredicted RBP16.11■□□□□ 0.17
EPCAM-205ENST00000474691 ADGRF4Q8IZF3 695 aa16.11■□□□□ 0.17
EPCAM-205ENST00000474691 SYTL5Q8TDW5 730 aaPredicted RBP16.11■□□□□ 0.17
EPCAM-205ENST00000474691 UBAC1Q9BSL1 405 aa16.11■□□□□ 0.17
EPCAM-205ENST00000474691 CPVLQ9H3G5 476 aa16.11■□□□□ 0.17
EPCAM-205ENST00000474691 CDH23Q9H251 3354 aa16.11■□□□□ 0.17
EPCAM-205ENST00000474691 GBF1Q92538 1859 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 ABHD14A-ACY1A0A1B0GW23 586 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 EIF3JO75822 258 aaKnown RBP16.1■□□□□ 0.17
EPCAM-205ENST00000474691 EIF2AK2P19525 551 aaKnown RBP16.1■□□□□ 0.17
EPCAM-205ENST00000474691 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
EPCAM-205ENST00000474691 WDR5P61964 334 aaKnown RBP16.1■□□□□ 0.17
EPCAM-205ENST00000474691 GRB10Q13322 594 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 IMMTQ16891 758 aaKnown RBP16.1■□□□□ 0.17
EPCAM-205ENST00000474691 GDF6Q6KF10 455 aaPredicted RBP16.1■□□□□ 0.17
EPCAM-205ENST00000474691 SESTD1Q86VW0 696 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 TBC1D10CQ8IV04 446 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 ZSCAN10Q96SZ4 725 aaPredicted RBP16.1■□□□□ 0.17
EPCAM-205ENST00000474691 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 MTUS1Q9ULD2 1270 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 HCN4Q9Y3Q4 1203 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 SALL3Q9BXA9 1300 aa16.1■□□□□ 0.17
EPCAM-205ENST00000474691 HIP1O00291 1037 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 MYCLP12524 364 aaPredicted RBP16.09■□□□□ 0.17
EPCAM-205ENST00000474691 SDSP20132 328 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 PSEN2P49810 448 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 MFSD10Q14728 455 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 QRICH1Q2TAL8 776 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 KRT40Q6A162 431 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 CCDC62Q6P9F0 684 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 KCNV1Q6PIU1 500 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
EPCAM-205ENST00000474691 VWCEQ96DN2 955 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 AMNQ9BXJ7 453 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 KRT23Q9C075 422 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 LMCD1Q9NZU5 365 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 HDAC6Q9UBN7 1215 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 GTF2IRD1Q9UHL9 959 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 NEDD4P46934 1319 aa16.09■□□□□ 0.17
EPCAM-205ENST00000474691 TTC28Q96AY4 2481 aa16.08■□□□□ 0.17
EPCAM-205ENST00000474691 VCANP13611 3396 aa16.08■□□□□ 0.17
EPCAM-205ENST00000474691 EPOPA6NHQ4 379 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 NR3C2P08235 984 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 CKBP12277 381 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 ARHGAP1Q07960 439 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 TRAF1Q13077 416 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 PTK7Q13308 1070 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 HDAC1Q13547 482 aaPredicted RBP16.08■□□□□ 0.16
EPCAM-205ENST00000474691 KIAA0753Q2KHM9 967 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 B4GALNT3Q6L9W6 998 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 FAM117BQ6P1L5 589 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 TGS1Q96RS0 853 aaKnown RBP16.08■□□□□ 0.16
EPCAM-205ENST00000474691 RAD9AQ99638 391 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
EPCAM-205ENST00000474691 CNNM2Q9H8M5 875 aa16.08■□□□□ 0.16
EPCAM-205ENST00000474691 B4E1Z4 1266 aa16.07■□□□□ 0.16
EPCAM-205ENST00000474691 AMHP03971 560 aa16.07■□□□□ 0.16
EPCAM-205ENST00000474691 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
EPCAM-205ENST00000474691 PPTC7Q8NI37 304 aa16.07■□□□□ 0.16
EPCAM-205ENST00000474691 GDPD5Q8WTR4 605 aa16.07■□□□□ 0.16
EPCAM-205ENST00000474691 SPATA33Q96N06 139 aa16.07■□□□□ 0.16
EPCAM-205ENST00000474691 MLXIPQ9HAP2 919 aa16.07■□□□□ 0.16
EPCAM-205ENST00000474691 DDX41Q9UJV9 622 aaKnown RBP16.07■□□□□ 0.16
EPCAM-205ENST00000474691 SCN10AQ9Y5Y9 1956 aa16.07■□□□□ 0.16
EPCAM-205ENST00000474691 SCN5AQ14524 2016 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
EPCAM-205ENST00000474691 LCTP09848 1927 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 ZNF286BP0CG31 522 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 PLA2G5P39877 138 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 TRDNQ13061 729 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 TMEM31Q5JXX7 168 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 TMCO2Q7Z6W1 182 aaPredicted RBP16.06■□□□□ 0.16
EPCAM-205ENST00000474691 KAT2BQ92831 832 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
EPCAM-205ENST00000474691 MAP3K20Q9NYL2 800 aaKnown RBP16.06■□□□□ 0.16
EPCAM-205ENST00000474691 EMSYQ7Z589 1322 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 SORBS3O60504 671 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 PPFIA4O75335 1185 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 GJB5O95377 273 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 THPOP40225 353 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 DEFB103AP81534 67 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 EMID1Q96A84 441 aaPredicted RBP16.05■□□□□ 0.16
EPCAM-205ENST00000474691 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 COL20A1Q9P218 1284 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 INSL6Q9Y581 213 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 PCDHA1Q9Y5I3 950 aa16.05■□□□□ 0.16
EPCAM-205ENST00000474691 ERICH2A1L162 156 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 C17orf102A2RUQ5 167 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 LCHNA4D1U4 455 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
EPCAM-205ENST00000474691 NBNO60934 754 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 LGR5O75473 907 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 ARHGEF15O94989 841 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 CXCL10P02778 98 aa16.04■□□□□ 0.16
EPCAM-205ENST00000474691 RBL2Q08999 1139 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms