RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 USH1GQ495M9 461 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 CNGA4Q8IV77 575 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 SPICE1Q8N0Z3 855 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 P2RX5Q93086 422 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 IQCDQ96DY2 449 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 AKR1B15C9JRZ8 316 aaPredicted RBP24.32■■□□□ 1.48
CCM2-206ENST00000474617 ZSCAN12O43309 604 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 CCT6AP40227 531 aaKnown RBP24.32■■□□□ 1.48
CCM2-206ENST00000474617 KRT31Q15323 416 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 TTI2Q6NXR4 508 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 NYAP1Q6ZVC0 841 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 GUF1Q8N442 669 aaKnown RBP24.32■■□□□ 1.48
CCM2-206ENST00000474617 MYRIPQ8NFW9 859 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 TRIM47Q96LD4 638 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 PLIN2Q99541 437 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 BCS1LQ9Y276 419 aa24.32■■□□□ 1.48
CCM2-206ENST00000474617 A0A1W2PQC6 194 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 N4BP3O15049 544 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 MUTP22033 750 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 GTF2F1P35269 517 aaKnown RBP eCLIP24.31■■□□□ 1.48
CCM2-206ENST00000474617 COPB1P53618 953 aaKnown RBP24.31■■□□□ 1.48
CCM2-206ENST00000474617 USP14P54578 494 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 APOBEC3FQ8IUX4 373 aaKnown RBP24.31■■□□□ 1.48
CCM2-206ENST00000474617 LRRC15Q8TF66 581 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 TEPSINQ96N21 525 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 FEZ1Q99689 392 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 PPP2R3BQ9Y5P8 575 aa24.31■■□□□ 1.48
CCM2-206ENST00000474617 DYNC1I1O14576 645 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 TNNT1P13805 278 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 PTGER2P43116 358 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 GHRHRQ02643 423 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 LRRC63Q05C16 580 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 PRPF38AQ8NAV1 312 aaKnown RBP24.3■■□□□ 1.48
CCM2-206ENST00000474617 BAG1Q99933 345 aaPredicted RBP24.3■■□□□ 1.48
CCM2-206ENST00000474617 PITPNM2Q9BZ72 1349 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 MYMKA6NI61 221 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 OPLAHO14841 1288 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 GMPSP49915 693 aaPredicted RBP24.3■■□□□ 1.48
CCM2-206ENST00000474617 SETQ01105 290 aaPredicted RBP24.3■■□□□ 1.48
CCM2-206ENST00000474617 MCM6Q14566 821 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 MIGA2Q7L4E1 593 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 MCF2L2Q86YR7 1114 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 MICALL2Q8IY33 904 aa24.3■■□□□ 1.48
CCM2-206ENST00000474617 ATAD5Q96QE3 1844 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 ICAM1P05362 532 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 RPA1P27694 616 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 ZNF76P36508 570 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 EHHADHQ08426 723 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 PRR16Q569H4 304 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 CENPPQ6IPU0 288 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 CCDC65Q8IXS2 484 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 TC2NQ8N9U0 490 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 KIFC2Q96AC6 838 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 LENG9Q96B70 501 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 MAF1Q9H063 256 aa24.29■■□□□ 1.48
CCM2-206ENST00000474617 CNOT7Q9UIV1 285 aaKnown RBP24.29■■□□□ 1.48
CCM2-206ENST00000474617 HSP90AA4PQ58FG1 418 aa24.28■■□□□ 1.48
CCM2-206ENST00000474617 KIAA1755Q5JYT7 1200 aa24.28■■□□□ 1.48
CCM2-206ENST00000474617 KRT26Q7Z3Y9 468 aa24.28■■□□□ 1.48
CCM2-206ENST00000474617 CSGALNACT2Q8N6G5 542 aa24.28■■□□□ 1.48
CCM2-206ENST00000474617 DDX12PQ92771 950 aa24.28■■□□□ 1.48
CCM2-206ENST00000474617 C16orf45Q96MC5 204 aaPredicted RBP24.28■■□□□ 1.48
CCM2-206ENST00000474617 POLR3CQ9BUI4 534 aaPredicted RBP24.28■■□□□ 1.48
CCM2-206ENST00000474617 ZNF341Q9BYN7 854 aa24.28■■□□□ 1.48
CCM2-206ENST00000474617 LGALS16A8MUM7 142 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 DNM2P50570 870 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 SPIRE1Q08AE8 756 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 KIF4BQ2VIQ3 1234 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 CEP135Q66GS9 1140 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 E4F1Q66K89 784 aaPredicted RBP24.27■■□□□ 1.48
CCM2-206ENST00000474617 RETREG2Q8NC44 543 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 SLF1Q9BQI6 1058 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 AS3MTQ9HBK9 375 aa24.27■■□□□ 1.48
CCM2-206ENST00000474617 PPP1R1BQ9UD71 204 aaPredicted RBP24.27■■□□□ 1.48
CCM2-206ENST00000474617 STK4Q13043 487 aa24.26■■□□□ 1.47
CCM2-206ENST00000474617 TSG101Q99816 390 aa24.26■■□□□ 1.47
CCM2-206ENST00000474617 WDR18Q9BV38 432 aa24.26■■□□□ 1.47
CCM2-206ENST00000474617 UQCRHLA0A096LP55 91 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 UQCRHP07919 91 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 PLA2G4BP0C869 781 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 FECHP22830 423 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 R3HDM1Q15032 1099 aaKnown RBP24.25■■□□□ 1.47
CCM2-206ENST00000474617 LDHDQ86WU2 507 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 NUP58Q9BVL2 599 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 SRRTQ9BXP5 876 aaKnown RBP24.25■■□□□ 1.47
CCM2-206ENST00000474617 DNM3Q9UQ16 869 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 FAM86B1E9PN63 330 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 FAM86B2P0C5J1 330 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 HSD17B4P51659 736 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 SNAP25P60880 206 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 NIPA1Q7RTP0 329 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 IRF2BP1Q8IU81 584 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 TMEM139Q8IV31 216 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 KIAA0895Q8NCT3 520 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 KIF18AQ8NI77 898 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 PPP1R13BQ96KQ4 1090 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 WDR11Q9BZH6 1224 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 TUFT1Q9NNX1 390 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 HACL1Q9UJ83 578 aa24.25■■□□□ 1.47
CCM2-206ENST00000474617 ZNF112Q9UJU3 913 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms