RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 COL6A3P12111 3177 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 ABCB11O95342 1321 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 RAD50Q92878 1312 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 GRXCR1A8MXD5 290 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 DHX16O60231 1041 aaKnown RBP10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 ARIH2O95376 493 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 MYL3P08590 195 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 CYP21A2P08686 494 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 CHMLP26374 656 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 CPT1AP50416 773 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 FOSBP53539 338 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 PTH1RQ03431 593 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 PPP2R5BQ15173 497 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 SCFD2Q8WU76 684 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 TAAR1Q96RJ0 339 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 MPHOSPH6Q99547 160 aaKnown RBP10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 NOC4LQ9BVI4 516 aaKnown RBP10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 SEZ6LQ9BYH1 1024 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 WNT8AQ9H1J5 351 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 ALDH8A1Q9H2A2 487 aaPredicted RBP10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 HIPK3Q9H422 1215 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 VAT1LQ9HCJ6 419 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 IL23AQ9NPF7 189 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 POLR3EQ9NVU0 708 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 LHX6Q9UPM6 363 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 TAF6LQ9Y6J9 622 aa10.24□□□□□ -0.77
TNFRSF9-202ENST00000474475 A0A0C4DFX4 3053 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 MYH6P13533 1939 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 TMEM265A0A087WTH1 108 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 A6NJR5 290 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 B4DLN1 442 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 OPLAHO14841 1288 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 NKRFO15226 690 aaKnown RBP eCLIP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 PPP1R11O60927 126 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 TXNP10599 105 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 DNAJB2P25686 324 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 PBX2P40425 430 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 MRPL12P52815 198 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 CCL23P55773 120 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 SLC35G1Q2M3R5 365 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 IFIT1BQ5T764 474 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 CCDC62Q6P9F0 684 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 PSRC1Q6PGN9 363 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 FBXO11Q86XK2 927 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 PPP1R13LQ8WUF5 828 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 VWCEQ96DN2 955 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 MTG1Q9BT17 334 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 MAF1Q9H063 256 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 TRMT13Q9NUP7 481 aaKnown RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 CXXC1Q9P0U4 656 aaPredicted RBP10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 MAD2L2Q9UI95 211 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
TNFRSF9-202ENST00000474475 PALM3A6NDB9 673 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 KLRF2D3W0D1 207 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 SGSM2O43147 1006 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 ST18O60284 1047 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 CYP2C9P11712 490 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 TTLL4Q14679 1199 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 GRIN2CQ14957 1233 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 NBPF20Q3BBV1 942 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 STOX1Q6ZVD7 989 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 MCF2L2Q86YR7 1114 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 NSUN6Q8TEA1 469 aaKnown RBP10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 HERVK_113Q902F9 699 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 TIFAQ96CG3 184 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 MTMR8Q96EF0 704 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 SCLYQ96I15 445 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 RMDN3Q96TC7 470 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 COL25A1Q9BXS0 654 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 PBX4Q9BYU1 374 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 MRPL11Q9Y3B7 192 aaKnown RBP10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 KIAA1217Q5T5P2 1943 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 SCN10AQ9Y5Y9 1956 aa10.22□□□□□ -0.77
TNFRSF9-202ENST00000474475 E7EWF7 191 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 MAP3K7O43318 606 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 KPNA6O60684 536 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 CFBP00751 764 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 FGBP02675 491 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 SUPT20HL2P0C7V6 817 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 FOSL2P15408 326 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 EIF2AK2P19525 551 aaKnown RBP10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 HSD17B4P51659 736 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 GHRHRQ02643 423 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 ARHGAP1Q07960 439 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 TRDNQ13061 729 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 GRM4Q14833 912 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 STXBP2Q15833 593 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 LY6KQ17RY6 165 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 BRDTQ58F21 947 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 FAM47CQ5HY64 1035 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 SEPT14Q6ZU15 432 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 CHST3Q7LGC8 479 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 OTOP2Q7RTS6 562 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 MAFAQ8NHW3 353 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms