RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 LEMD3Q9Y2U8 911 aa8.82□□□□□ -1
VPS50-211ENST00000474412 PRR19A6NJB7 356 aa8.81□□□□□ -1
VPS50-211ENST00000474412 TRAF5O00463 557 aa8.81□□□□□ -1
VPS50-211ENST00000474412 PSMD14O00487 310 aa8.81□□□□□ -1
VPS50-211ENST00000474412 ADMP35318 185 aa8.81□□□□□ -1
VPS50-211ENST00000474412 ZC3H12AQ5D1E8 599 aaKnown RBP8.81□□□□□ -1
VPS50-211ENST00000474412 BEND3Q5T5X7 828 aa8.81□□□□□ -1
VPS50-211ENST00000474412 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
VPS50-211ENST00000474412 CIAPIN1Q6FI81 312 aa8.81□□□□□ -1
VPS50-211ENST00000474412 TTBK2Q6IQ55 1244 aa8.81□□□□□ -1
VPS50-211ENST00000474412 DLK2Q6UY11 383 aa8.81□□□□□ -1
VPS50-211ENST00000474412 TMC4Q7Z404 712 aa8.81□□□□□ -1
VPS50-211ENST00000474412 NBPF11Q86T75 865 aa8.81□□□□□ -1
VPS50-211ENST00000474412 SMYD4Q8IYR2 804 aaPredicted RBP8.81□□□□□ -1
VPS50-211ENST00000474412 MYH16Q9H6N6 1097 aa8.81□□□□□ -1
VPS50-211ENST00000474412 SSU72Q9NP77 194 aaKnown RBP8.81□□□□□ -1
VPS50-211ENST00000474412 PCDHA4Q9UN74 947 aa8.81□□□□□ -1
VPS50-211ENST00000474412 CSADQ9Y600 493 aa8.81□□□□□ -1
VPS50-211ENST00000474412 ZNF609O15014 1411 aa8.8□□□□□ -1
VPS50-211ENST00000474412 SNAP23O00161 211 aa8.8□□□□□ -1
VPS50-211ENST00000474412 DYNC1LI2O43237 492 aaPredicted RBP8.8□□□□□ -1
VPS50-211ENST00000474412 SORBS3O60504 671 aa8.8□□□□□ -1
VPS50-211ENST00000474412 CD97P48960 835 aa8.8□□□□□ -1
VPS50-211ENST00000474412 ERVK-24P63145 666 aa8.8□□□□□ -1
VPS50-211ENST00000474412 TAGLNQ01995 201 aaKnown RBP8.8□□□□□ -1
VPS50-211ENST00000474412 MAP3K11Q16584 847 aa8.8□□□□□ -1
VPS50-211ENST00000474412 XP32Q5T750 250 aa8.8□□□□□ -1
VPS50-211ENST00000474412 RASIP1Q5U651 963 aa8.8□□□□□ -1
VPS50-211ENST00000474412 ANKRD18AQ8IVF6 992 aa8.8□□□□□ -1
VPS50-211ENST00000474412 JMYQ8N9B5 988 aa8.8□□□□□ -1
VPS50-211ENST00000474412 LINS1Q8NG48 757 aa8.8□□□□□ -1
VPS50-211ENST00000474412 TMX4Q9H1E5 349 aaPredicted RBP8.8□□□□□ -1
VPS50-211ENST00000474412 PODXL2Q9NZ53 605 aa8.8□□□□□ -1
VPS50-211ENST00000474412 CNTNAP1P78357 1384 aa8.8□□□□□ -1
VPS50-211ENST00000474412 MED23Q9ULK4 1368 aa8.8□□□□□ -1
VPS50-211ENST00000474412 CDK5RAP2Q96SN8 1893 aa8.8□□□□□ -1
VPS50-211ENST00000474412 PCNTO95613 3336 aa8.8□□□□□ -1
VPS50-211ENST00000474412 ASTN2O75129 1339 aaPredicted RBP8.8□□□□□ -1
VPS50-211ENST00000474412 XDHP47989 1333 aa8.8□□□□□ -1
VPS50-211ENST00000474412 CASP8AP2Q9UKL3 1982 aa8.79□□□□□ -1
VPS50-211ENST00000474412 DCDC2CA8MYV0 355 aa8.79□□□□□ -1
VPS50-211ENST00000474412 FOXO4P98177 505 aa8.79□□□□□ -1
VPS50-211ENST00000474412 SLFN5Q08AF3 891 aa8.79□□□□□ -1
VPS50-211ENST00000474412 CPSF6Q16630 551 aaKnown RBP eCLIP8.79□□□□□ -1
VPS50-211ENST00000474412 SCARA3Q6AZY7 606 aa8.79□□□□□ -1
VPS50-211ENST00000474412 SHISA5Q8N114 240 aa8.79□□□□□ -1
VPS50-211ENST00000474412 CNTROBQ8N137 903 aa8.79□□□□□ -1
VPS50-211ENST00000474412 ELMO3Q96BJ8 720 aa8.79□□□□□ -1
VPS50-211ENST00000474412 MXD3Q9BW11 206 aa8.79□□□□□ -1
VPS50-211ENST00000474412 PLA2G12BQ9BX93 195 aa8.79□□□□□ -1
VPS50-211ENST00000474412 GLIS2Q9BZE0 524 aaPredicted RBP8.79□□□□□ -1
VPS50-211ENST00000474412 CACNA2D2Q9NY47 1150 aa8.79□□□□□ -1
VPS50-211ENST00000474412 VTI1BQ9UEU0 232 aa8.79□□□□□ -1
VPS50-211ENST00000474412 DOCK2Q92608 1830 aa8.78□□□□□ -1
VPS50-211ENST00000474412 FAM170BA6NMN3 283 aa8.78□□□□□ -1
VPS50-211ENST00000474412 CYP27A1Q02318 531 aa8.78□□□□□ -1
VPS50-211ENST00000474412 TBC1D10BQ4KMP7 808 aaPredicted RBP8.78□□□□□ -1
VPS50-211ENST00000474412 SLC4A10Q6U841 1118 aa8.78□□□□□ -1
VPS50-211ENST00000474412 SEZ6L2Q6UXD5 910 aa8.78□□□□□ -1
VPS50-211ENST00000474412 RNF214Q8ND24 703 aa8.78□□□□□ -1
VPS50-211ENST00000474412 SSH1Q8WYL5 1049 aa8.78□□□□□ -1
VPS50-211ENST00000474412 KAZALD1Q96I82 304 aa8.78□□□□□ -1
VPS50-211ENST00000474412 SUCLG2Q96I99 432 aa8.78□□□□□ -1
VPS50-211ENST00000474412 CDC5LQ99459 802 aaKnown RBP8.78□□□□□ -1
VPS50-211ENST00000474412 VPS33BQ9H267 617 aa8.78□□□□□ -1
VPS50-211ENST00000474412 C1GALT1Q9NS00 363 aa8.78□□□□□ -1
VPS50-211ENST00000474412 ADARB2Q9NS39 739 aaKnown RBP8.78□□□□□ -1
VPS50-211ENST00000474412 MINPP1Q9UNW1 487 aa8.78□□□□□ -1
VPS50-211ENST00000474412 MYH2Q9UKX2 1941 aa8.78□□□□□ -1
VPS50-211ENST00000474412 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
VPS50-211ENST00000474412 MAST2Q6P0Q8 1798 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 GRM8O00222 908 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 MED26O95402 600 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 CSF1RP07333 972 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 NBPF7P0C2Y1 421 aaPredicted RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 HSPA1AP0DMV8 641 aaKnown RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 HSPA1BP0DMV9 641 aaKnown RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 CCT4P50991 539 aaKnown RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 TAF1CQ15572 869 aaPredicted RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 PPM1JQ5JR12 505 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 USP50Q70EL3 339 aaPredicted RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 ZNF765Q7L2R6 523 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 PNMA8AQ86V59 439 aaPredicted RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.77□□□□□ -1.01
VPS50-211ENST00000474412 GATA6Q92908 595 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 ISL2Q96A47 359 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 EYA3Q99504 573 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 CNOT7Q9UIV1 285 aaKnown RBP8.77□□□□□ -1.01
VPS50-211ENST00000474412 PCOLCE2Q9UKZ9 415 aa8.77□□□□□ -1.01
VPS50-211ENST00000474412 AK9Q5TCS8 1911 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 ADM5C9JUS6 153 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 E9PSI1 815 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 CCER2I3L3R5 266 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 CYP26A1O43174 497 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 TAF5LO75529 589 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 LIG3P49916 1009 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 CHRNDQ07001 517 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 CDK5R2Q13319 367 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 LMBR1LQ6UX01 489 aa8.76□□□□□ -1.01
VPS50-211ENST00000474412 C12orf40Q86WS4 652 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms