RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 ARPP21Q9UBL0 812 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-209ENST00000473783 C5orf67F2Z3F1 127 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 RB1P06400 928 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 ICAM3P32942 547 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 NDUFV1P49821 464 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 ATP8B2P98198 1209 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 PTK7Q13308 1070 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 ADAM15Q13444 863 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 TRAF7Q6Q0C0 670 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 ADSSL1Q8N142 457 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 C11orf84Q9BUA3 381 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-209ENST00000473783 GTF2IRD1Q9UHL9 959 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 SPTBN2O15020 2390 aa12.54□□□□□ -0.4
SSBP1-209ENST00000473783 DNAH14Q0VDD8 3507 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 CHD6Q8TD26 2715 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 GOLIM4O00461 696 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 CTNNB1P35222 781 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 ADD2P35612 726 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 IKQ13123 557 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-209ENST00000473783 MBTPS1Q14703 1052 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 ZNF618Q5T7W0 954 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 SLFN13Q68D06 897 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 AACSQ86V21 672 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 DBF4BQ8NFT6 615 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 STAG1Q8WVM7 1258 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 TOP1MTQ969P6 601 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 PPP2R3CQ969Q6 453 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 PURBQ96QR8 312 aaKnown RBP12.53□□□□□ -0.4
SSBP1-209ENST00000473783 MKNK2Q9HBH9 465 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 RWDD3Q9Y3V2 267 aa12.53□□□□□ -0.4
SSBP1-209ENST00000473783 MAP1BP46821 2468 aaKnown RBP12.53□□□□□ -0.4
SSBP1-209ENST00000473783 ATRXP46100 2492 aa12.52□□□□□ -0.4
SSBP1-209ENST00000473783 LINC01565O15544 149 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 PLA2G6O60733 806 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 BCAR3O75815 825 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 TTLL1O95922 423 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 TXNP10599 105 aaKnown RBP12.52□□□□□ -0.41
SSBP1-209ENST00000473783 COASYQ13057 564 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 TRIM71Q2Q1W2 868 aaKnown RBP12.52□□□□□ -0.41
SSBP1-209ENST00000473783 DGLUCYQ7Z3D6 616 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 FAM9BQ8IZU0 186 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 COPS5Q92905 334 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 CEP95Q96GE4 821 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 GMCL1Q96IK5 515 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 RIPOR3Q96MK2 946 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 MPHOSPH6Q99547 160 aaKnown RBP12.52□□□□□ -0.41
SSBP1-209ENST00000473783 PHF7Q9BWX1 381 aaPredicted RBP12.52□□□□□ -0.41
SSBP1-209ENST00000473783 MTMR4Q9NYA4 1195 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 ISY1Q9ULR0 285 aaKnown RBP12.52□□□□□ -0.41
SSBP1-209ENST00000473783 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 MYO10Q9HD67 2058 aa12.52□□□□□ -0.41
SSBP1-209ENST00000473783 KIAA1217Q5T5P2 1943 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 GRM6O15303 877 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 MMP3P08254 477 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 GTF2F1P35269 517 aaKnown RBP eCLIP12.51□□□□□ -0.41
SSBP1-209ENST00000473783 BMPR1AP36894 532 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 RRP1P56182 461 aaKnown RBP12.51□□□□□ -0.41
SSBP1-209ENST00000473783 PDE4BQ07343 736 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 PDE4DQ08499 809 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 BAATQ14032 418 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-209ENST00000473783 SBK1Q52WX2 424 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 PLEKHG4Q58EX7 1191 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 FRMD5Q7Z6J6 570 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 FIBCD1Q8N539 461 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 C7orf31Q8N865 590 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 KAT2BQ92831 832 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 DNAJC2Q99543 621 aaKnown RBP12.51□□□□□ -0.41
SSBP1-209ENST00000473783 IGFLR1Q9H665 355 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 CCPG1Q9ULG6 757 aa12.51□□□□□ -0.41
SSBP1-209ENST00000473783 USP15Q9Y4E8 981 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-209ENST00000473783 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-209ENST00000473783 MMP1P03956 469 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 ICAM1P05362 532 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 CASTP20810 708 aaKnown RBP12.5□□□□□ -0.41
SSBP1-209ENST00000473783 EDNRBP24530 442 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 SLC1A4P43007 532 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
SSBP1-209ENST00000473783 ERC1Q8IUD2 1116 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 EFHBQ8N7U6 833 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 RMDN1Q96DB5 314 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 KATNAL1Q9BW62 490 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 IFIH1Q9BYX4 1025 aaKnown RBP12.5□□□□□ -0.41
SSBP1-209ENST00000473783 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.417e-14■□□□□ 9.4
SSBP1-209ENST00000473783 ZNF287Q9HBT7 754 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 INCENPQ9NQS7 918 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 CLEC1BQ9P126 229 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 HDAC6Q9UBN7 1215 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 PKD1L2Q7Z442 2459 aa12.5□□□□□ -0.41
SSBP1-209ENST00000473783 OTOGLQ3ZCN5 2332 aa12.49□□□□□ -0.41
SSBP1-209ENST00000473783 IPO8O15397 1037 aaKnown RBP12.49□□□□□ -0.41
SSBP1-209ENST00000473783 UPP2O95045 317 aa12.49□□□□□ -0.41
SSBP1-209ENST00000473783 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-209ENST00000473783 TRIM27P14373 513 aa12.49□□□□□ -0.41
SSBP1-209ENST00000473783 ATF7P17544 494 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-209ENST00000473783 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
SSBP1-209ENST00000473783 ZNF444Q8N0Y2 327 aaPredicted RBP12.49□□□□□ -0.41
SSBP1-209ENST00000473783 SEPT8Q92599 483 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms