RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 LARP4BQ92615 738 aaKnown RBP12.17□□□□□ -0.46
C9orf3-214ENST00000473778 DRC1Q96MC2 740 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 PSMB7Q99436 277 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 JADE2Q9NQC1 790 aa12.17□□□□□ -0.46
C9orf3-214ENST00000473778 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
C9orf3-214ENST00000473778 LRRC53A6NM62 1247 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 AGPSO00116 658 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 PRPF6O94906 941 aaKnown RBP12.16□□□□□ -0.46
C9orf3-214ENST00000473778 MOCS3O95396 460 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 EIF4A3P38919 411 aaKnown RBP12.16□□□□□ -0.46
C9orf3-214ENST00000473778 KIF11P52732 1056 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 APBA1Q02410 837 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 UBE2SQ16763 222 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 UNC13DQ70J99 1090 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 BAP1Q92560 729 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 CCDC42Q96M95 316 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 ESYT2A0FGR8 921 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 EIF3JO75822 258 aaKnown RBP12.16□□□□□ -0.46
C9orf3-214ENST00000473778 IL1R1P14778 569 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 CXCR5P32302 372 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 ACTN2P35609 894 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 NT5C2P49902 561 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
C9orf3-214ENST00000473778 CCDC96Q2M329 555 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 FAM114A1Q8IWE2 563 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 FAM71BQ8TC56 605 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 DDX12PQ92771 950 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 CALML4Q96GE6 196 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 IFIH1Q9BYX4 1025 aaKnown RBP12.16□□□□□ -0.46
C9orf3-214ENST00000473778 FAM204AQ9H8W3 233 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 ZNHIT6Q9NWK9 470 aaKnown RBP12.16□□□□□ -0.46
C9orf3-214ENST00000473778 GEMIN8Q9NWZ8 242 aaKnown RBP12.16□□□□□ -0.46
C9orf3-214ENST00000473778 POLLQ9UGP5 575 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 PCDHA13Q9Y5I0 950 aa12.16□□□□□ -0.46
C9orf3-214ENST00000473778 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 ANO9A1A5B4 782 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 RNF40O75150 1001 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 LDHCP07864 332 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 AKR1B1P15121 316 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 AMPD3Q01432 767 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 KCNMA1Q12791 1236 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 KIF5AQ12840 1032 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 SOGA3Q5TF21 947 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 NFRKBQ6P4R8 1299 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 C15orf52Q6ZUT6 534 aaKnown RBP12.15□□□□□ -0.46
C9orf3-214ENST00000473778 HAS1Q92839 578 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 GBP3Q9H0R5 595 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 MMRN2Q9H8L6 949 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 MTMR4Q9NYA4 1195 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 DMGDHQ9UI17 866 aaKnown RBP12.15□□□□□ -0.46
C9orf3-214ENST00000473778 SNX12Q9UMY4 172 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 LY75O60449 1722 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 NCK2O43639 380 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 LCA5LO95447 670 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 RFC4P35249 363 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.46
C9orf3-214ENST00000473778 GFPT1Q06210 699 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-214ENST00000473778 ASTE1Q2TB18 679 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-214ENST00000473778 FKBP15Q5T1M5 1219 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 HGSNATQ68CP4 663 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 TTBK2Q6IQ55 1244 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 RRAGAQ7L523 313 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 GOLGA5Q8TBA6 731 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 RAD54LQ92698 747 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 SELENOOQ9BVL4 669 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 GPCPD1Q9NPB8 672 aa12.15□□□□□ -0.46
C9orf3-214ENST00000473778 DDX4Q9NQI0 724 aaKnown RBP12.15□□□□□ -0.46
C9orf3-214ENST00000473778 GAKO14976 1311 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 TARSL2A2RTX5 802 aaKnown RBP12.14□□□□□ -0.47
C9orf3-214ENST00000473778 TUBBP07437 444 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 SNHG28P0DPA3 235 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 GGCXP38435 758 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 GABPAQ06546 454 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 PICALMQ13492 652 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 MAN2A1Q16706 1144 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 CCNI2Q6ZMN8 369 aaPredicted RBP12.14□□□□□ -0.47
C9orf3-214ENST00000473778 TMC4Q7Z404 712 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 GUF1Q8N442 669 aaKnown RBP12.14□□□□□ -0.47
C9orf3-214ENST00000473778 SNX29Q8TEQ0 813 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 CCDC47Q96A33 483 aaKnown RBP12.14□□□□□ -0.47
C9orf3-214ENST00000473778 DNAJC19Q96DA6 116 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 MTMR8Q96EF0 704 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 C8orf37Q96NL8 207 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 LRRC1Q9BTT6 524 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 RSPH14Q9UHP6 348 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 DAGLAQ9Y4D2 1042 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 TRIM66O15016 1216 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 TLR2O60603 784 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 NOL4O94818 638 aa12.14□□□□□ -0.47
C9orf3-214ENST00000473778 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
C9orf3-214ENST00000473778 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms