RNA–Protein interactions for RNA: ENST00000471913.5

AMPH-208, Transcript of amphiphysin, humanhuman

TSL 1 (best)

Gene AMPH, Length 1,778 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-208ENST00000471913 FKBP15Q5T1M5 1219 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 PAPD7Q5XG87 772 aaKnown RBP13.3□□□□□ -0.28
AMPH-208ENST00000471913 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 CALML4Q96GE6 196 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 EIF3CQ99613 913 aaKnown RBP13.3□□□□□ -0.28
AMPH-208ENST00000471913 TUBGCP2Q9BSJ2 902 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 EPC1Q9H2F5 836 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 L1RE1Q9UN81 338 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 PVALEFA0A1B0GWK0 134 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 TARSL2A2RTX5 802 aaKnown RBP13.3□□□□□ -0.28
AMPH-208ENST00000471913 TRIM49BA6NDI0 452 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 RNF225M0QZC1 329 aaPredicted RBP13.3□□□□□ -0.28
AMPH-208ENST00000471913 ADAMTS3O15072 1205 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 ENTPD3O75355 529 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 PLCG1P19174 1290 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 CDC25AP30304 524 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 ZNF280AP59817 542 aaPredicted RBP13.3□□□□□ -0.28
AMPH-208ENST00000471913 MAP9Q49MG5 647 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 RASGRP4Q8TDF6 673 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 RAB34Q9BZG1 259 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 TDRD3Q9H7E2 651 aaKnown RBP13.3□□□□□ -0.28
AMPH-208ENST00000471913 VIPAS39Q9H9C1 493 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 STX8Q9UNK0 236 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 SBF1O95248 1867 aa13.3□□□□□ -0.28
AMPH-208ENST00000471913 TRIM21P19474 475 aaKnown RBP13.29□□□□□ -0.28
AMPH-208ENST00000471913 LMNB1P20700 586 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 HNRNPH3P31942 346 aaKnown RBP13.29□□□□□ -0.28
AMPH-208ENST00000471913 EIF6P56537 245 aaKnown RBP13.29□□□□□ -0.28
AMPH-208ENST00000471913 PDE4DQ08499 809 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 TBC1D8BQ0IIM8 1120 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 DLGAP5Q15398 846 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 MUM1L1Q5H9M0 696 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 ZFPM1Q8IX07 1006 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 SLC44A5Q8NCS7 719 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 RUBCNQ92622 972 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 CHP1Q99653 195 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 DUSP9Q99956 384 aaKnown RBP13.29□□□□□ -0.28
AMPH-208ENST00000471913 EHD4Q9H223 541 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
AMPH-208ENST00000471913 MAPK8IP1Q9UQF2 711 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
AMPH-208ENST00000471913 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
AMPH-208ENST00000471913 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
AMPH-208ENST00000471913 MYH8P13535 1937 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 A0A0U1RQJ8 604 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 SMCO2A6NFE2 343 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 POLR3GO15318 223 aaPredicted RBP13.28□□□□□ -0.28
AMPH-208ENST00000471913 CCNT1O60563 726 aaKnown RBP13.28□□□□□ -0.28
AMPH-208ENST00000471913 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
AMPH-208ENST00000471913 PMS1P54277 932 aaKnown RBP13.28□□□□□ -0.28
AMPH-208ENST00000471913 CACNB3P54284 484 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 SLC35G1Q2M3R5 365 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 SPDYE2Q495Y8 402 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 CCDC122Q5T0U0 273 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 PPP1R18Q6NYC8 613 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 WDR59Q6PJI9 974 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 KIAA1328Q86T90 577 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
AMPH-208ENST00000471913 PNKPQ96T60 521 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 ZSWIM4Q9H7M6 989 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 MED4Q9NPJ6 270 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 GUCA1BQ9UMX6 200 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 ATRNL1Q5VV63 1379 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
AMPH-208ENST00000471913 PP2D1A8MPX8 630 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.28
AMPH-208ENST00000471913 COBLO75128 1261 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 ASIC1P78348 528 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 TMEM266Q2M3C6 531 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 LETM2Q2VYF4 491 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 FKBP1CQ5VVH2 108 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 CENPPQ6IPU0 288 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 CCDC84Q86UT8 332 aaPredicted RBP13.27□□□□□ -0.28
AMPH-208ENST00000471913 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.28
AMPH-208ENST00000471913 JAKMIP2Q96AA8 810 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 PURBQ96QR8 312 aaKnown RBP13.27□□□□□ -0.28
AMPH-208ENST00000471913 EDEM3Q9BZQ6 932 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 ZNF70Q9UC06 446 aaPredicted RBP13.27□□□□□ -0.28
AMPH-208ENST00000471913 SWAP70Q9UH65 585 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 SIPA1L1O43166 1804 aa13.27□□□□□ -0.28
AMPH-208ENST00000471913 B4DLN1 442 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 HLA-DOAP06340 250 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
AMPH-208ENST00000471913 MTIF2P46199 727 aaKnown RBP13.27□□□□□ -0.29
AMPH-208ENST00000471913 HERVK_113P62684 666 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 LRRC63Q05C16 580 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 TCP10Q12799 353 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 PSMD2Q13200 908 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 PDIA5Q14554 519 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 SEPT2Q15019 361 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 HSP90B2PQ58FF3 399 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 UNC13DQ70J99 1090 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 SV2BQ7L1I2 683 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 FAM71BQ8TC56 605 aa13.27□□□□□ -0.29
AMPH-208ENST00000471913 NOC4LQ9BVI4 516 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms