RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 DIRC2Q96SL1 478 aa6.79□□□□□ -1.32
CDHR3-208ENST00000471910 FEZ1Q99689 392 aa6.79□□□□□ -1.32
CDHR3-208ENST00000471910 AP5M1Q9H0R1 490 aa6.79□□□□□ -1.32
CDHR3-208ENST00000471910 EPB41L1Q9H4G0 881 aa6.79□□□□□ -1.32
CDHR3-208ENST00000471910 NSUN3Q9H649 340 aaKnown RBP6.79□□□□□ -1.32
CDHR3-208ENST00000471910 ZNF552Q9H707 407 aaPredicted RBP6.79□□□□□ -1.32
CDHR3-208ENST00000471910 PCDHA9Q9Y5H5 950 aa6.79□□□□□ -1.32
CDHR3-208ENST00000471910 PCDHA8Q9Y5H6 950 aa6.79□□□□□ -1.32
CDHR3-208ENST00000471910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.78□□□□□ -1.32
CDHR3-208ENST00000471910 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.78□□□□□ -1.32
CDHR3-208ENST00000471910 PAX4O43316 350 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
CDHR3-208ENST00000471910 MAFKO60675 156 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 ZBTB7AO95365 584 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 CRTAMO95727 393 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 SDHBP21912 280 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 MAPKAPK2P49137 400 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 PABPC4Q13310 644 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDHR3-208ENST00000471910 TMEM132EQ6IEE7 984 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
CDHR3-208ENST00000471910 PRR23BQ6ZRT6 265 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 ZNF605Q86T29 641 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 NLRP10Q86W26 655 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 ZC3H7AQ8IWR0 971 aaKnown RBP6.78□□□□□ -1.32
CDHR3-208ENST00000471910 NLGN1Q8N2Q7 840 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 SEC14L1Q92503 715 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 NUB1Q9Y5A7 615 aa6.78□□□□□ -1.32
CDHR3-208ENST00000471910 ZC3H12DA2A288 527 aaKnown RBP6.77□□□□□ -1.33
CDHR3-208ENST00000471910 B4E1Z4 1266 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 KRIT1O00522 736 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 YBX1P67809 324 aaKnown RBP6.77□□□□□ -1.33
CDHR3-208ENST00000471910 ST5P78524 1137 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 SPIRE1Q08AE8 756 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 SLC9A5Q14940 896 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 PLEKHG4Q58EX7 1191 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 FAM47CQ5HY64 1035 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 RPTNQ6XPR3 784 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 BRAPQ7Z569 592 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 PANK1Q8TE04 598 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 JAM3Q9BX67 310 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 SIRT5Q9NXA8 310 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 KLHL14Q9P2G3 628 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 FBXL7Q9UJT9 491 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 CD2APQ9Y5K6 639 aa6.77□□□□□ -1.33
CDHR3-208ENST00000471910 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
CDHR3-208ENST00000471910 ARVCFO00192 962 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 PEX10O60683 326 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 GNAT1P11488 350 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 FLT3P36888 993 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 SLC6A11P48066 632 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 SRSF3P84103 164 aaKnown RBP6.76□□□□□ -1.33
CDHR3-208ENST00000471910 FBXO15Q8NCQ5 510 aaPredicted RBP6.76□□□□□ -1.33
CDHR3-208ENST00000471910 NINJ1Q92982 152 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 FBXW5Q969U6 566 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 CLUHP3Q96NS8 147 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 KCNJ15Q99712 375 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 IPPKQ9H8X2 491 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 PPARGC1AQ9UBK2 798 aaKnown RBP6.76□□□□□ -1.33
CDHR3-208ENST00000471910 FBLN5Q9UBX5 448 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 PLAAQ9Y263 795 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 RNF114Q9Y508 228 aa6.76□□□□□ -1.33
CDHR3-208ENST00000471910 HGSO14964 777 aaPredicted RBP6.75□□□□□ -1.33
CDHR3-208ENST00000471910 OPA1O60313 960 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 ASLP04424 464 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 SRGAP2CP0DJJ0 459 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 STEAP3Q658P3 488 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 EP400NLQ6ZTU2 488 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 KIAA0907Q7Z7F0 614 aaPredicted RBP6.75□□□□□ -1.33
CDHR3-208ENST00000471910 TRIM39Q9HCM9 518 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 SLC6A20Q9NP91 592 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 CATSPERZQ9NTU4 200 aa6.75□□□□□ -1.33
CDHR3-208ENST00000471910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDHR3-208ENST00000471910 MAGEC2Q9UBF1 373 aaPredicted RBP6.75□□□□□ -1.33
CDHR3-208ENST00000471910 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 RASGRP1O95267 797 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 NPTXRO95502 500 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 VIPR1P32241 457 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 IGFALSP35858 605 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 PRR5P85299 388 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 CRY1Q16526 586 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 TKFCQ3LXA3 575 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 PLEKHN1Q494U1 663 aaPredicted RBP6.74□□□□□ -1.33
CDHR3-208ENST00000471910 UBE2R2Q712K3 238 aaPredicted RBP6.74□□□□□ -1.33
CDHR3-208ENST00000471910 C16orf59Q7L2K0 433 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 OTOP3Q7RTS5 596 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 TMC6Q7Z403 805 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 NIM1KQ8IY84 436 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 PCDH19Q8TAB3 1148 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDHR3-208ENST00000471910 TSPAN17Q96FV3 270 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 SCLYQ96I15 445 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 RXFP1Q9HBX9 757 aa6.74□□□□□ -1.33
CDHR3-208ENST00000471910 INTS7Q9NVH2 962 aaKnown RBP6.74□□□□□ -1.33
CDHR3-208ENST00000471910 TCRBV16S1A1N1A0A5B0 115 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 WNT9AO14904 365 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 FARP2O94887 1054 aaPredicted RBP6.73□□□□□ -1.33
CDHR3-208ENST00000471910 DNM2P50570 870 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms