RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 POLR3EQ9NVU0 708 aa17.06■□□□□ 0.32
SSR4-208ENST00000471880 ARVCFO00192 962 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 CABYRO75952 493 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 GH1P01241 217 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 NAPAP54920 295 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 ITGA7Q13683 1181 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 C1orf53Q5VUE5 145 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 IL31RAQ8NI17 732 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 BADQ92934 168 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
SSR4-208ENST00000471880 SCN10AQ9Y5Y9 1956 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 CNTNAP5Q8WYK1 1306 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 ITGB8P26012 769 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 BMP8BP34820 402 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 UBE2SQ16763 222 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 PPP1R13LQ8WUF5 828 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 AFG1LQ8WV93 481 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 KCNB2Q92953 911 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
SSR4-208ENST00000471880 USP26Q9BXU7 913 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
SSR4-208ENST00000471880 PPP1R12CQ9BZL4 782 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 RTEL1Q9NZ71 1219 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
SSR4-208ENST00000471880 V9GY48 417 aaPredicted RBP17.04■□□□□ 0.32
SSR4-208ENST00000471880 CCDC196A0A1B0GTZ2 297 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 CDC27P30260 824 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 ADD1P35611 737 aaKnown RBP17.03■□□□□ 0.32
SSR4-208ENST00000471880 NKX3-2P78367 333 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 AKAP17AQ02040 695 aaKnown RBP17.03■□□□□ 0.32
SSR4-208ENST00000471880 GHRHRQ02643 423 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 FAAP100Q0VG06 881 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
SSR4-208ENST00000471880 TDHQ8IZJ6 230 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 LRCH3Q96II8 777 aa17.03■□□□□ 0.32
SSR4-208ENST00000471880 MTG1Q9BT17 334 aaPredicted RBP17.03■□□□□ 0.32
SSR4-208ENST00000471880 LAMA2P24043 3122 aaKnown RBP17.02■□□□□ 0.32
SSR4-208ENST00000471880 SPDYE3A6NKU9 549 aa17.02■□□□□ 0.32
SSR4-208ENST00000471880 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
SSR4-208ENST00000471880 CCT2P78371 535 aaKnown RBP17.02■□□□□ 0.32
SSR4-208ENST00000471880 GNPTABQ3T906 1256 aa17.02■□□□□ 0.32
SSR4-208ENST00000471880 WWC2Q6AWC2 1192 aa17.02■□□□□ 0.32
SSR4-208ENST00000471880 CCDC62Q6P9F0 684 aa17.02■□□□□ 0.32
SSR4-208ENST00000471880 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
SSR4-208ENST00000471880 LARP6Q9BRS8 491 aaKnown RBP17.02■□□□□ 0.32
SSR4-208ENST00000471880 DDX41Q9UJV9 622 aaKnown RBP17.02■□□□□ 0.32
SSR4-208ENST00000471880 A0A1W2PPC1 479 aa17.01■□□□□ 0.31
SSR4-208ENST00000471880 GGPS1O95749 300 aa17.01■□□□□ 0.31
SSR4-208ENST00000471880 PURAQ00577 322 aaKnown RBP17.01■□□□□ 0.31
SSR4-208ENST00000471880 ARHGAP1Q07960 439 aa17.01■□□□□ 0.31
SSR4-208ENST00000471880 VSIG10LQ86VR7 867 aa17.01■□□□□ 0.31
SSR4-208ENST00000471880 TOX2Q96NM4 488 aa17.01■□□□□ 0.31
SSR4-208ENST00000471880 MLXIPQ9HAP2 919 aa17.01■□□□□ 0.31
SSR4-208ENST00000471880 GRIN2DO15399 1336 aa17■□□□□ 0.31
SSR4-208ENST00000471880 MEIS2O14770 477 aa17■□□□□ 0.31
SSR4-208ENST00000471880 KIAA0355O15063 1070 aa17■□□□□ 0.31
SSR4-208ENST00000471880 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
SSR4-208ENST00000471880 KPNA6O60684 536 aa17■□□□□ 0.31
SSR4-208ENST00000471880 MMP3P08254 477 aa17■□□□□ 0.31
SSR4-208ENST00000471880 CDK7P50613 346 aa17■□□□□ 0.31
SSR4-208ENST00000471880 ADCY7P51828 1080 aa17■□□□□ 0.31
SSR4-208ENST00000471880 FPGSQ05932 587 aa17■□□□□ 0.31
SSR4-208ENST00000471880 STK3Q13188 491 aa17■□□□□ 0.31
SSR4-208ENST00000471880 LAMC2Q13753 1193 aa17■□□□□ 0.31
SSR4-208ENST00000471880 KCNV1Q6PIU1 500 aa17■□□□□ 0.31
SSR4-208ENST00000471880 FAM126BQ8IXS8 530 aa17■□□□□ 0.31
SSR4-208ENST00000471880 SPATA33Q96N06 139 aa17■□□□□ 0.31
SSR4-208ENST00000471880 TRPV6Q9H1D0 765 aa17■□□□□ 0.31
SSR4-208ENST00000471880 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
SSR4-208ENST00000471880 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
SSR4-208ENST00000471880 PDRG1Q9NUG6 133 aa17■□□□□ 0.31
SSR4-208ENST00000471880 NOD1Q9Y239 953 aa17■□□□□ 0.31
SSR4-208ENST00000471880 TRIP12Q14669 1992 aaPredicted RBP17■□□□□ 0.31
SSR4-208ENST00000471880 SCN5AQ14524 2016 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 A6NJR5 290 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 RCAN1P53805 252 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 SP4Q02446 784 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 DGKDQ16760 1214 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 PHKBQ93100 1093 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 PGBD1Q96JS3 809 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 SLC26A6Q9BXS9 759 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 NCOA5Q9HCD5 579 aaKnown RBP16.99■□□□□ 0.31
SSR4-208ENST00000471880 FAM217BQ9NTX9 383 aaPredicted RBP16.99■□□□□ 0.31
SSR4-208ENST00000471880 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
SSR4-208ENST00000471880 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 NOP56O00567 594 aaKnown RBP16.98■□□□□ 0.31
SSR4-208ENST00000471880 CPLX1O14810 134 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 B4GALT4O60513 344 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 RGS20O76081 388 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 ZNF286BP0CG31 522 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 UBA1P22314 1058 aaKnown RBP16.98■□□□□ 0.31
SSR4-208ENST00000471880 EPHB4P54760 987 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 MRPS9P82933 396 aaKnown RBP16.98■□□□□ 0.31
SSR4-208ENST00000471880 NLRX1Q86UT6 975 aa16.98■□□□□ 0.31
SSR4-208ENST00000471880 ALG1Q9BT22 464 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms