RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 RAB11FIP4Q86YS3 637 aa27.05■■□□□ 1.92
RNF220-208ENST00000471494 AFG1LQ8WV93 481 aa27.05■■□□□ 1.92
RNF220-208ENST00000471494 MMP3P08254 477 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 CSF2RAP15509 400 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 CCND2P30279 289 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 CYP2C18P33260 490 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 KRT32Q14532 448 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 SYNE3Q6ZMZ3 975 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 SGMS1Q86VZ5 419 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 MICU3Q86XE3 530 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 SRBD1Q8N5C6 995 aaKnown RBP27.04■■□□□ 1.92
RNF220-208ENST00000471494 IL31RAQ8NI17 732 aa27.04■■□□□ 1.92
RNF220-208ENST00000471494 DDX41Q9UJV9 622 aaKnown RBP27.04■■□□□ 1.92
RNF220-208ENST00000471494 SUPT20HL2P0C7V6 817 aa27.03■■□□□ 1.92
RNF220-208ENST00000471494 NBPF20Q3BBV1 942 aa27.03■■□□□ 1.92
RNF220-208ENST00000471494 VSIG10LQ86VR7 867 aa27.03■■□□□ 1.92
RNF220-208ENST00000471494 NOC4LQ9BVI4 516 aaKnown RBP27.03■■□□□ 1.92
RNF220-208ENST00000471494 SMAD3P84022 425 aaKnown RBP27.02■■□□□ 1.92
RNF220-208ENST00000471494 TSGA10IPQ3SY00 556 aa27.02■■□□□ 1.92
RNF220-208ENST00000471494 FAM109BQ6ICB4 259 aaPredicted RBP27.02■■□□□ 1.92
RNF220-208ENST00000471494 NFRKBQ6P4R8 1299 aa27.02■■□□□ 1.92
RNF220-208ENST00000471494 KCNV1Q6PIU1 500 aa27.02■■□□□ 1.92
RNF220-208ENST00000471494 RASEFQ8IZ41 740 aa27.02■■□□□ 1.92
RNF220-208ENST00000471494 CMTR1Q8N1G2 835 aaKnown RBP27.02■■□□□ 1.92
RNF220-208ENST00000471494 FANCBQ8NB91 859 aa27.02■■□□□ 1.92
RNF220-208ENST00000471494 CUL5Q93034 780 aa27.02■■□□□ 1.92
RNF220-208ENST00000471494 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.02■■□□□ 1.925e-7■■■■■ 32.9
RNF220-208ENST00000471494 TRMT13Q9NUP7 481 aaKnown RBP27.02■■□□□ 1.92
RNF220-208ENST00000471494 UMODL1Q5DID0 1318 aa27.01■■□□□ 1.91
RNF220-208ENST00000471494 CHMP4BP1P59074 171 aa27.01■■□□□ 1.91
RNF220-208ENST00000471494 PSRC1Q6PGN9 363 aaPredicted RBP27.01■■□□□ 1.91
RNF220-208ENST00000471494 TMTC3Q6ZXV5 915 aa27.01■■□□□ 1.91
RNF220-208ENST00000471494 DHX32Q7L7V1 743 aaKnown RBP27.01■■□□□ 1.91
RNF220-208ENST00000471494 DHX37Q8IY37 1157 aaKnown RBP27.01■■□□□ 1.91
RNF220-208ENST00000471494 SMARCC2Q8TAQ2 1214 aa27.01■■□□□ 1.91
RNF220-208ENST00000471494 EMID1Q96A84 441 aaPredicted RBP27.01■■□□□ 1.91
RNF220-208ENST00000471494 TCEANC2Q96MN5 208 aa27.01■■□□□ 1.91
RNF220-208ENST00000471494 MTMR10Q9NXD2 777 aa27.01■■□□□ 1.91
RNF220-208ENST00000471494 RGS20O76081 388 aa27■■□□□ 1.91
RNF220-208ENST00000471494 CASTP20810 708 aaKnown RBP27■■□□□ 1.91
RNF220-208ENST00000471494 PTPN11Q06124 597 aaPredicted RBP27■■□□□ 1.91
RNF220-208ENST00000471494 LAMC2Q13753 1193 aa27■■□□□ 1.91
RNF220-208ENST00000471494 ADCK5Q3MIX3 580 aa27■■□□□ 1.91
RNF220-208ENST00000471494 ZNF697Q5TEC3 545 aa27■■□□□ 1.91
RNF220-208ENST00000471494 APOA5Q6Q788 366 aa27■■□□□ 1.91
RNF220-208ENST00000471494 TANC1Q9C0D5 1861 aa27■■□□□ 1.91
RNF220-208ENST00000471494 FRMPD4Q14CM0 1322 aa26.99■■□□□ 1.91
RNF220-208ENST00000471494 CCL23P55773 120 aa26.99■■□□□ 1.91
RNF220-208ENST00000471494 EXOSC10Q01780 885 aaKnown RBP26.99■■□□□ 1.91
RNF220-208ENST00000471494 DGKDQ16760 1214 aa26.99■■□□□ 1.91
RNF220-208ENST00000471494 CCDC82Q8N4S0 544 aa26.99■■□□□ 1.91
RNF220-208ENST00000471494 PPP1R13LQ8WUF5 828 aa26.99■■□□□ 1.91
RNF220-208ENST00000471494 IL23AQ9NPF7 189 aa26.99■■□□□ 1.91
RNF220-208ENST00000471494 DOCK5Q9H7D0 1870 aa26.98■■□□□ 1.91
RNF220-208ENST00000471494 HMGB1P09429 215 aaKnown RBP26.98■■□□□ 1.91
RNF220-208ENST00000471494 ACRP10323 421 aa26.98■■□□□ 1.91
RNF220-208ENST00000471494 CYP2C9P11712 490 aa26.98■■□□□ 1.91
RNF220-208ENST00000471494 TMEM240Q5SV17 173 aa26.98■■□□□ 1.91
RNF220-208ENST00000471494 C16orf59Q7L2K0 433 aa26.98■■□□□ 1.91
RNF220-208ENST00000471494 PPTC7Q8NI37 304 aa26.98■■□□□ 1.91
RNF220-208ENST00000471494 ZFP91Q96JP5 570 aaPredicted RBP26.98■■□□□ 1.91
RNF220-208ENST00000471494 RBM28Q9NW13 759 aaKnown RBP26.98■■□□□ 1.91
RNF220-208ENST00000471494 hCG_1642624A0A1W2PR95 340 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 ZBTB43O43298 467 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 TGFB3P10600 412 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 GNPTABQ3T906 1256 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 USP17L6PQ6QN14 398 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 ZNF365Q70YC5 407 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 WNT8AQ9H1J5 351 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 NOD1Q9Y239 953 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 SCN5AQ14524 2016 aa26.97■■□□□ 1.91
RNF220-208ENST00000471494 TRIP12Q14669 1992 aaPredicted RBP26.97■■□□□ 1.91
RNF220-208ENST00000471494 PIK3CDO00329 1044 aa26.96■■□□□ 1.91
RNF220-208ENST00000471494 STAM2O75886 525 aa26.96■■□□□ 1.91
RNF220-208ENST00000471494 GGPS1O95749 300 aa26.96■■□□□ 1.91
RNF220-208ENST00000471494 UBA1P22314 1058 aaKnown RBP26.96■■□□□ 1.91
RNF220-208ENST00000471494 FGD1P98174 961 aa26.96■■□□□ 1.91
RNF220-208ENST00000471494 RTN1Q16799 776 aa26.96■■□□□ 1.91
RNF220-208ENST00000471494 CELF3Q5SZQ8 465 aaKnown RBP26.96■■□□□ 1.91
RNF220-208ENST00000471494 FAM161BQ96MY7 647 aa26.96■■□□□ 1.91
RNF220-208ENST00000471494 PSTPIP2Q9H939 334 aa26.96■■□□□ 1.91
RNF220-208ENST00000471494 MEIS2O14770 477 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 SORBS3O60504 671 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 REC8O95072 547 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 MYSM1Q5VVJ2 828 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 HEATR3Q7Z4Q2 680 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 SPATA33Q96N06 139 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 KATNAL1Q9BW62 490 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 MTIF3Q9H2K0 278 aaKnown RBP26.95■■□□□ 1.9
RNF220-208ENST00000471494 BRPF3Q9ULD4 1205 aa26.95■■□□□ 1.9
RNF220-208ENST00000471494 CNTNAP5Q8WYK1 1306 aa26.94■■□□□ 1.9
RNF220-208ENST00000471494 KLF18A0A0U1RQI7 1052 aa26.94■■□□□ 1.9
RNF220-208ENST00000471494 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.94■■□□□ 1.9
RNF220-208ENST00000471494 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.94■■□□□ 1.9
RNF220-208ENST00000471494 ZNF286BP0CG31 522 aa26.94■■□□□ 1.9
RNF220-208ENST00000471494 MRPS9P82933 396 aaKnown RBP26.94■■□□□ 1.9
RNF220-208ENST00000471494 KAT2BQ92831 832 aa26.94■■□□□ 1.9
RNF220-208ENST00000471494 SCLYQ96I15 445 aa26.94■■□□□ 1.9
RNF220-208ENST00000471494 INPP4AQ96PE3 977 aaPredicted RBP26.94■■□□□ 1.9
RNF220-208ENST00000471494 STXBP5LQ9Y2K9 1186 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms