RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 TRPV6Q9H1D0 765 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-206ENST00000471459 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
HOXB3-206ENST00000471459 DDX41Q9UJV9 622 aaKnown RBP17.2■□□□□ 0.34
HOXB3-206ENST00000471459 NOD1Q9Y239 953 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 DNAH12Q6ZR08 3092 aa17.2■□□□□ 0.34
HOXB3-206ENST00000471459 STAM2O75886 525 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 ARIH2O95376 493 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 RXRAP19793 462 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 PTPN11Q06124 597 aaPredicted RBP17.19■□□□□ 0.34
HOXB3-206ENST00000471459 NBPF20Q3BBV1 942 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 NFRKBQ6P4R8 1299 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 MICU3Q86XE3 530 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 RPUSD2Q8IZ73 545 aaKnown RBP17.19■□□□□ 0.34
HOXB3-206ENST00000471459 CCDC82Q8N4S0 544 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
HOXB3-206ENST00000471459 MTIF3Q9H2K0 278 aaKnown RBP17.19■□□□□ 0.34
HOXB3-206ENST00000471459 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 GRIN2DO15399 1336 aa17.19■□□□□ 0.34
HOXB3-206ENST00000471459 ZBTB43O43298 467 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 B4GALT4O60513 344 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 PLEKHA8P1O95397 391 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 CSF2RAP15509 400 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 CYP2C18P33260 490 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 SMAD3P84022 425 aaKnown RBP17.18■□□□□ 0.34
HOXB3-206ENST00000471459 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
HOXB3-206ENST00000471459 FAM109BQ6ICB4 259 aaPredicted RBP17.18■□□□□ 0.34
HOXB3-206ENST00000471459 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 PSRC1Q6PGN9 363 aaPredicted RBP17.18■□□□□ 0.34
HOXB3-206ENST00000471459 RETREG2Q8NC44 543 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 KATNAL1Q9BW62 490 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 MLXIPQ9HAP2 919 aa17.18■□□□□ 0.34
HOXB3-206ENST00000471459 NAP1L2Q9ULW6 460 aaPredicted RBP17.18■□□□□ 0.34
HOXB3-206ENST00000471459 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.17■□□□□ 0.34
HOXB3-206ENST00000471459 CCDC196A0A1B0GTZ2 297 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.17■□□□□ 0.34
HOXB3-206ENST00000471459 PPFIA4O75335 1185 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 MMP3P08254 477 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 PSMA5P28066 241 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 ARHGAP1Q07960 439 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 ZNF697Q5TEC3 545 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
HOXB3-206ENST00000471459 PPTC7Q8NI37 304 aa17.17■□□□□ 0.34
HOXB3-206ENST00000471459 EMID1Q96A84 441 aaPredicted RBP17.17■□□□□ 0.34
HOXB3-206ENST00000471459 PIK3CDO00329 1044 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 FGBP02675 491 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 EPHB4P54760 987 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 RTN1Q16799 776 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 BLOC1S2Q6QNY1 142 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 CCDC155Q8N6L0 562 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 C7orf31Q8N865 590 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 SPATA33Q96N06 139 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 NOC4LQ9BVI4 516 aaKnown RBP17.16■□□□□ 0.34
HOXB3-206ENST00000471459 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 IL23AQ9NPF7 189 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 TRMT13Q9NUP7 481 aaKnown RBP17.16■□□□□ 0.34
HOXB3-206ENST00000471459 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
HOXB3-206ENST00000471459 SPDYE3A6NKU9 549 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 GGPS1O95749 300 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
HOXB3-206ENST00000471459 CCL23P55773 120 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 BFSP2Q13515 415 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 NEDD9Q14511 834 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 ADCK5Q3MIX3 580 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 CELF3Q5SZQ8 465 aaKnown RBP17.15■□□□□ 0.34
HOXB3-206ENST00000471459 USP17L6PQ6QN14 398 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 HEATR3Q7Z4Q2 680 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 NLRX1Q86UT6 975 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 TCEANC2Q96MN5 208 aa17.15■□□□□ 0.34
HOXB3-206ENST00000471459 JAKMIP1Q96N16 626 aaKnown RBP17.15■□□□□ 0.34
HOXB3-206ENST00000471459 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
HOXB3-206ENST00000471459 KLF18A0A0U1RQI7 1052 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 GOLGA8AA7E2F4 631 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 GOLGA8BA8MQT2 603 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 NOP56O00567 594 aaKnown RBP17.14■□□□□ 0.33
HOXB3-206ENST00000471459 CYP2C9P11712 490 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 HSPA4P34932 840 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 RCAN1P53805 252 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 PTGISQ16647 500 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 TMEM240Q5SV17 173 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 MYSM1Q5VVJ2 828 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 PCNX4Q63HM2 1172 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 Q7L0L9 218 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 MTMR10Q9NXD2 777 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 RTEL1Q9NZ71 1219 aa17.14■□□□□ 0.33
HOXB3-206ENST00000471459 LCTP09848 1927 aa17.13■□□□□ 0.33
HOXB3-206ENST00000471459 LRRC37A2A6NM11 1700 aa17.13■□□□□ 0.33
HOXB3-206ENST00000471459 hCG_1642624A0A1W2PR95 340 aa17.13■□□□□ 0.33
HOXB3-206ENST00000471459 MEIS2O14770 477 aa17.13■□□□□ 0.33
HOXB3-206ENST00000471459 FIBPO43427 364 aa17.13■□□□□ 0.33
HOXB3-206ENST00000471459 EPB41L2O43491 1005 aaKnown RBP17.13■□□□□ 0.33
HOXB3-206ENST00000471459 RGS20O76081 388 aa17.13■□□□□ 0.33
HOXB3-206ENST00000471459 PFKMP08237 780 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms