RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 TBX1O43435 398 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 CAPNS1P04632 268 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 C6orf222P0C671 652 aaPredicted RBP5.7□□□□□ -1.5
CFHR3-205ENST00000471440 SLFN14P0C7P3 912 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 ID3Q02535 119 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 NCAPHQ15003 741 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 LRRC14Q15048 493 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 MLC1Q15049 377 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 DDX46Q7L014 1031 aaKnown RBP5.7□□□□□ -1.5
CFHR3-205ENST00000471440 KRT28Q7Z3Y7 464 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 NECAB2Q7Z6G3 386 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 LRRC59Q96AG4 307 aaKnown RBP5.7□□□□□ -1.5
CFHR3-205ENST00000471440 SLC12A5Q9H2X9 1139 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 INTS7Q9NVH2 962 aaKnown RBP5.7□□□□□ -1.5
CFHR3-205ENST00000471440 BSDC1Q9NW68 430 aaPredicted RBP5.7□□□□□ -1.5
CFHR3-205ENST00000471440 CRIM1Q9NZV1 1036 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 TAGLN3Q9UI15 199 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 KIF1AQ12756 1690 aa5.7□□□□□ -1.5
CFHR3-205ENST00000471440 ASPAP45381 313 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 PPP2R2AP63151 447 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 TCIRG1Q13488 830 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 HDAC1Q13547 482 aaPredicted RBP5.69□□□□□ -1.5
CFHR3-205ENST00000471440 BRD3Q15059 726 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 SKOR2Q2VWA4 1001 aaPredicted RBP5.69□□□□□ -1.5
CFHR3-205ENST00000471440 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 NLRC3Q7RTR2 1065 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 ZNF700Q9H0M5 742 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 PHAXQ9H814 394 aaKnown RBP5.69□□□□□ -1.5
CFHR3-205ENST00000471440 CRTAC1Q9NQ79 661 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 FAM86C1Q9NVL1 165 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 USP32Q8NFA0 1604 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 ITSN1Q15811 1721 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 KIF7Q2M1P5 1343 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 CCDC163A0A0D9SF12 145 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 WDHD1O75717 1129 aaPredicted RBP5.69□□□□□ -1.5
CFHR3-205ENST00000471440 FSTP19883 344 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 LONRF3Q496Y0 759 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 ZC3H12BQ5HYM0 836 aaKnown RBP5.69□□□□□ -1.5
CFHR3-205ENST00000471440 INTS3Q68E01 1043 aaKnown RBP5.69□□□□□ -1.5
CFHR3-205ENST00000471440 PPFIBP1Q86W92 1011 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 CLEC10AQ8IUN9 316 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 TEX2Q8IWB9 1127 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 TPH2Q8IWU9 490 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 CNTD1Q8N815 330 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 CHMP4CQ96CF2 233 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 PLPPR2Q96GM1 343 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 FANCD2OSQ96PS1 177 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 FMNL2Q96PY5 1086 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 EPN3Q9H201 632 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 SEMA6CQ9H3T2 930 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 GSX1Q9H4S2 264 aaPredicted RBP5.69□□□□□ -1.5
CFHR3-205ENST00000471440 AASDHPPTQ9NRN7 309 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 GMIPQ9P107 970 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 APEX2Q9UBZ4 518 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 ZNF180Q9UJW8 692 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 SBNO1A3KN83 1393 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 CCDC7Q96M83 1385 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 ROBO1Q9Y6N7 1651 aa5.69□□□□□ -1.5
CFHR3-205ENST00000471440 CPSF1Q10570 1443 aaKnown RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 TRBV23-1A0A0A0MS06 115 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 FAM95CA0A1B0GW59 222 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 NEMP1O14524 444 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 TNFRSF10CO14798 259 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 FGAP02671 866 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 ZC3H12AQ5D1E8 599 aaKnown RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 WIPI1Q5MNZ9 446 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 DGKHQ86XP1 1220 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 SCLYQ96I15 445 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 FAM83CQ9BQN1 747 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 YIPF2Q9BWQ6 316 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 ATXN3LQ9H3M9 355 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 ACSS3Q9H6R3 686 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 CNNM2Q9H8M5 875 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 SLC52A2Q9HAB3 445 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 PIDD1Q9HB75 910 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 ZNF214Q9UL59 606 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 PCDHA4Q9UN74 947 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 DAGLAQ9Y4D2 1042 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 LAS1LQ9Y4W2 734 aaKnown RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 TNPO3Q9Y5L0 923 aaKnown RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 KTN1Q86UP2 1357 aaKnown RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 ANKRD36BQ8N2N9 1353 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 RGPD8O14715 1765 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 AHDC1Q5TGY3 1603 aaPredicted RBP5.68□□□□□ -1.5
CFHR3-205ENST00000471440 WASHC2AQ641Q2 1341 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 TOPAZ1Q8N9V7 1692 aa5.68□□□□□ -1.5
CFHR3-205ENST00000471440 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.67□□□□□ -1.5
CFHR3-205ENST00000471440 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 F2P00734 622 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 NFICP08651 508 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 POU3F2P20265 443 aaPredicted RBP5.67□□□□□ -1.5
CFHR3-205ENST00000471440 HSPA1LP34931 641 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 TMPRSS15P98073 1019 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 NFIAQ12857 509 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 TTLL4Q14679 1199 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 LRRFIP1Q32MZ4 808 aaKnown RBP5.67□□□□□ -1.5
CFHR3-205ENST00000471440 CDCP2Q5VXM1 449 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 LRFN4Q6PJG9 635 aa5.67□□□□□ -1.5
CFHR3-205ENST00000471440 BRAPQ7Z569 592 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms