RNA–Protein interactions for RNA: ENST00000471283.5

MUC1-218, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-218ENST00000471283 UBAC1Q9BSL1 405 aa17.18■□□□□ 0.34
MUC1-218ENST00000471283 PCDHA11Q9Y5I1 949 aa17.18■□□□□ 0.34
MUC1-218ENST00000471283 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
MUC1-218ENST00000471283 RGS20O76081 388 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 ARHGEF15O94989 841 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 NR3C2P08235 984 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 HSD17B4P51659 736 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 PTGISQ16647 500 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 TTC22Q5TAA0 569 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 ARHGEF16Q5VV41 709 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 GDF6Q6KF10 455 aaPredicted RBP17.17■□□□□ 0.34
MUC1-218ENST00000471283 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
MUC1-218ENST00000471283 CNNM2Q9H8M5 875 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 PXMP2Q9NR77 195 aa17.17■□□□□ 0.34
MUC1-218ENST00000471283 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
MUC1-218ENST00000471283 RFXAPO00287 272 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 PITPNM1O00562 1244 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 EIF3JO75822 258 aaKnown RBP17.16■□□□□ 0.34
MUC1-218ENST00000471283 PFKMP08237 780 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 CYP21A2P08686 494 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 GHRHRQ02643 423 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 PPP2R2DQ66LE6 453 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 RETREG2Q8NC44 543 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
MUC1-218ENST00000471283 AMNQ9BXJ7 453 aa17.16■□□□□ 0.34
MUC1-218ENST00000471283 SUPT16HQ9Y5B9 1047 aaKnown RBP17.16■□□□□ 0.34
MUC1-218ENST00000471283 CA3P07451 260 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 HOXA13P31271 388 aaPredicted RBP17.15■□□□□ 0.34
MUC1-218ENST00000471283 RFC2P35250 354 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 TJAP1Q5JTD0 557 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 SESTD1Q86VW0 696 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 HDAC6Q9UBN7 1215 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 PCDHA1Q9Y5I3 950 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
MUC1-218ENST00000471283 EPOPA6NHQ4 379 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 ZBTB5O15062 677 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 CYTH3O43739 400 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 SORBS3O60504 671 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 CASTP20810 708 aaKnown RBP17.14■□□□□ 0.33
MUC1-218ENST00000471283 CHMLP26374 656 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 BFSP2Q13515 415 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 HIC1Q14526 733 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 TCTN1Q2MV58 587 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 TMEM67Q5HYA8 995 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 STOX1Q6ZVD7 989 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.33
MUC1-218ENST00000471283 GPKOWQ92917 476 aaPredicted RBP eCLIP17.14■□□□□ 0.33
MUC1-218ENST00000471283 PIGSQ96S52 555 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 PDCD2LQ9BRP1 358 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
MUC1-218ENST00000471283 CERS4Q9HA82 394 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 NOD1Q9Y239 953 aa17.14■□□□□ 0.33
MUC1-218ENST00000471283 HAS3O00219 553 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 MYCLP12524 364 aaPredicted RBP17.13■□□□□ 0.33
MUC1-218ENST00000471283 ACTN1P12814 892 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 PSEN2P49810 448 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 ZNF200P98182 395 aaPredicted RBP17.13■□□□□ 0.33
MUC1-218ENST00000471283 SP2Q02086 613 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 GRM4Q14833 912 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 DGKDQ16760 1214 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 TMCO2Q7Z6W1 182 aaPredicted RBP17.13■□□□□ 0.33
MUC1-218ENST00000471283 VSIG10LQ86VR7 867 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 WNT8BQ93098 351 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 EMID1Q96A84 441 aaPredicted RBP17.13■□□□□ 0.33
MUC1-218ENST00000471283 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 RIOX1Q9H6W3 641 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 GTF2IRD1Q9UHL9 959 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 MRVI1Q9Y6F6 885 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 REV3LO60673 3130 aa17.13■□□□□ 0.33
MUC1-218ENST00000471283 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 IFIT3O14879 490 aaKnown RBP17.12■□□□□ 0.33
MUC1-218ENST00000471283 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 TROAPQ12815 778 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 LAMC2Q13753 1193 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 PGM5Q15124 567 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 MYSM1Q5VVJ2 828 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 HERC6Q8IVU3 1022 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
MUC1-218ENST00000471283 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
MUC1-218ENST00000471283 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
MUC1-218ENST00000471283 PRRC2BQ5JSZ5 2229 aaKnown RBP17.12■□□□□ 0.33
MUC1-218ENST00000471283 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 E7EWF7 191 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 NBNO60934 754 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 CKBP12277 381 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 ANTXR2P58335 489 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
MUC1-218ENST00000471283 TAP1Q03518 808 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 MFSD10Q14728 455 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 KIAA0753Q2KHM9 967 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 TRIM71Q2Q1W2 868 aaKnown RBP17.11■□□□□ 0.33
MUC1-218ENST00000471283 KRT40Q6A162 431 aa17.11■□□□□ 0.33
MUC1-218ENST00000471283 TRAF7Q6Q0C0 670 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms