RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 DENND5AQ6IQ26 1287 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 CNNM4Q6P4Q7 775 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 USP53Q70EK8 1073 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 FGD2Q7Z6J4 655 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 TSPYL5Q86VY4 417 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-204ENST00000471245 DTX1Q86Y01 620 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 SCLYQ96I15 445 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 FCRL3Q96P31 734 aaPredicted RBP7.72□□□□□ -1.17
CKS1B-204ENST00000471245 SLC12A9Q9BXP2 914 aa7.72□□□□□ -1.17
CKS1B-204ENST00000471245 TNPO3Q9Y5L0 923 aaKnown RBP7.72□□□□□ -1.17
CKS1B-204ENST00000471245 C2orf71A6NGG8 1288 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 B4E1Z4 1266 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 APPP05067 770 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 CEACAM5P06731 702 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 IFNGR1P15260 489 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 VAV1P15498 845 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 ENDOUP21128 410 aaKnown RBP7.71□□□□□ -1.18
CKS1B-204ENST00000471245 LRP8Q14114 963 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 NKPD1Q17RQ9 610 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 MSMPQ1L6U9 139 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 PLEKHG6Q3KR16 790 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 EEF1DP3Q658K8 133 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 GGT6Q6P531 493 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 ARHGAP27Q6ZUM4 889 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 KSR1Q8IVT5 923 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 SPACA3Q8IXA5 215 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 PRPF38AQ8NAV1 312 aaKnown RBP7.71□□□□□ -1.18
CKS1B-204ENST00000471245 LINC00116Q8NCU8 138 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 FRS2Q8WU20 508 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 STAG1Q8WVM7 1258 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 MAGEB10Q96LZ2 347 aaPredicted RBP7.71□□□□□ -1.18
CKS1B-204ENST00000471245 IRF2BPLQ9H1B7 796 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 SNX11Q9Y5W9 270 aa7.71□□□□□ -1.18
CKS1B-204ENST00000471245 SPAG9O60271 1321 aaKnown RBP7.71□□□□□ -1.18
CKS1B-204ENST00000471245 ZC3H13Q5T200 1668 aaKnown RBP7.7□□□□□ -1.18
CKS1B-204ENST00000471245 MED14O60244 1454 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 CCDC18Q5T9S5 1454 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 LRRC7Q96NW7 1537 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 TCRBV16S1A1N1A0A5B0 115 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 MEFVO15553 781 aaPredicted RBP7.7□□□□□ -1.18
CKS1B-204ENST00000471245 OPA1O60313 960 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 PRNPP04156 253 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 PDGFRBP09619 1106 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 CPEP16870 476 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 PMLP29590 882 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 FLT3P36888 993 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 SEPHS1P49903 392 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 CDKN1CP49918 316 aaPredicted RBP7.7□□□□□ -1.18
CKS1B-204ENST00000471245 PCBP3P57721 371 aaKnown RBP7.7□□□□□ -1.18
CKS1B-204ENST00000471245 NFKB2Q00653 900 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 KCNAB2Q13303 367 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 GAB4Q2WGN9 574 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 ANKLE2Q86XL3 938 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 JAMLQ86YT9 394 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.7□□□□□ -1.18
CKS1B-204ENST00000471245 FAM126AQ9BYI3 521 aaPredicted RBP7.7□□□□□ -1.18
CKS1B-204ENST00000471245 GPR27Q9NS67 375 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 U3KQE9 123 aa7.7□□□□□ -1.18
CKS1B-204ENST00000471245 TRBV23OR9-2A0A075B6M9 112 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 ALG1L2C9J202 215 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 MED26O95402 600 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 SPINK2P20155 84 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 LTBRP36941 435 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 HNRNPMP52272 730 aaKnown RBP eCLIP7.69□□□□□ -1.18
CKS1B-204ENST00000471245 GPR85P60893 370 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 ARTNQ5T4W7 220 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 IQCEQ6IPM2 695 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 RNF111Q6ZNA4 994 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 DDX42Q86XP3 938 aaKnown RBP eCLIP7.69□□□□□ -1.18
CKS1B-204ENST00000471245 NETO1Q8TDF5 533 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 MISP3Q96FF7 219 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 PHF20Q9BVI0 1012 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 HOMER2Q9NSB8 354 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 BSDC1Q9NW68 430 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-204ENST00000471245 ZC3H7BQ9UGR2 993 aaKnown RBP7.69□□□□□ -1.18
CKS1B-204ENST00000471245 TRAF6Q9Y4K3 522 aa7.69□□□□□ -1.18
CKS1B-204ENST00000471245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.69□□□□□ -1.18
CKS1B-204ENST00000471245 NPHP4O75161 1426 aaPredicted RBP7.69□□□□□ -1.18
CKS1B-204ENST00000471245 GPATCH8Q9UKJ3 1502 aaKnown RBP7.68□□□□□ -1.18
CKS1B-204ENST00000471245 UGGT1Q9NYU2 1555 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 HYAL3O43820 417 aaPredicted RBP7.68□□□□□ -1.18
CKS1B-204ENST00000471245 RASGRP1O95267 797 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 CRTAMO95727 393 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 HOXA10P31260 410 aaPredicted RBP7.68□□□□□ -1.18
CKS1B-204ENST00000471245 ZNF460Q14592 562 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 DHCR24Q15392 516 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 RTP2Q5QGT7 225 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 WWC2Q6AWC2 1192 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 DDX46Q7L014 1031 aaKnown RBP7.68□□□□□ -1.18
CKS1B-204ENST00000471245 IFNL3Q8IZI9 196 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 UBR7Q8N806 425 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 FAM181AQ8N9Y4 354 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 ORAI3Q9BRQ5 295 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 GPRC5CQ9NQ84 441 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 KLHL42Q9P2K6 505 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 TCFL5Q9UL49 500 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 TNRQ92752 1358 aa7.68□□□□□ -1.18
CKS1B-204ENST00000471245 PZPP20742 1482 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms