RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 SLC26A6Q9BXS9 759 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 AP5M1Q9H0R1 490 aa17.44■□□□□ 0.38
ABCF3-208ENST00000471226 A0A1W2PQ45 241 aaPredicted RBP17.43■□□□□ 0.38
ABCF3-208ENST00000471226 A0A1W2PQY0 241 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 SMCO2A6NFE2 343 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 ASGR1P07306 291 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 CCND2P30279 289 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 MRPS9P82933 396 aaKnown RBP17.43■□□□□ 0.38
ABCF3-208ENST00000471226 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
ABCF3-208ENST00000471226 SCRN1Q12765 414 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 SNX17Q15036 470 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 UBE2SQ16763 222 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 GNASQ5JWF2 1037 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 SLC39A5Q6ZMH5 540 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 FERMT2Q96AC1 680 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 SLKQ9H2G2 1235 aaPredicted RBP17.43■□□□□ 0.38
ABCF3-208ENST00000471226 DOCK5Q9H7D0 1870 aa17.43■□□□□ 0.38
ABCF3-208ENST00000471226 ESYT2A0FGR8 921 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 CPLX1O14810 134 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 EVI5O60447 810 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 PPFIA3O75145 1194 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 STAM2O75886 525 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 BEX3Q00994 111 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 FSCN1Q16658 493 aaKnown RBP17.42■□□□□ 0.38
ABCF3-208ENST00000471226 C1orf53Q5VUE5 145 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 PCNX4Q63HM2 1172 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 XRRA1Q6P2D8 792 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 CPLX2Q6PUV4 134 aaKnown RBP17.42■□□□□ 0.38
ABCF3-208ENST00000471226 COPS5Q92905 334 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 ZMYND12Q9H0C1 365 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 GLT8D2Q9H1C3 349 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 DDX41Q9UJV9 622 aaKnown RBP17.42■□□□□ 0.38
ABCF3-208ENST00000471226 PCDHA6Q9UN73 950 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 PCDHA8Q9Y5H6 950 aa17.42■□□□□ 0.38
ABCF3-208ENST00000471226 SPDYE3A6NKU9 549 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 CLK2P49760 499 aaKnown RBP17.41■□□□□ 0.38
ABCF3-208ENST00000471226 ADCY7P51828 1080 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 ATN1P54259 1190 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-208ENST00000471226 SSRP1Q08945 709 aaKnown RBP17.41■□□□□ 0.38
ABCF3-208ENST00000471226 ME3Q16798 604 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 LY6KQ17RY6 165 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 KCNV1Q6PIU1 500 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 TRIM22Q8IYM9 498 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-208ENST00000471226 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-208ENST00000471226 INPP4AQ96PE3 977 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-208ENST00000471226 NR2E3Q9Y5X4 410 aa17.41■□□□□ 0.38
ABCF3-208ENST00000471226 SCN10AQ9Y5Y9 1956 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 DEXIO95424 95 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 LARGE1O95461 756 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 FOSP01100 380 aaPredicted RBP17.4■□□□□ 0.38
ABCF3-208ENST00000471226 TGFB3P10600 412 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 ICAM3P32942 547 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 ARHGAP1Q07960 439 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 PRPF38BQ5VTL8 546 aaKnown RBP17.4■□□□□ 0.38
ABCF3-208ENST00000471226 STARD7Q9NQZ5 370 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 SH3GLB2Q9NR46 395 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 MRVI1Q9Y6F6 885 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 ELP1O95163 1332 aa17.4■□□□□ 0.38
ABCF3-208ENST00000471226 A6NJR5 290 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 ZEB2O60315 1214 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 CDKL5O76039 1030 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 CTDNEP1O95476 244 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 GH1P01241 217 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 CPT1AP50416 773 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 RTP1P59025 263 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 RTEL1Q9NZ71 1219 aa17.39■□□□□ 0.37
ABCF3-208ENST00000471226 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 H0YGN5 161 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 ADAMTS3O15072 1205 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 CABYRO75952 493 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 GNA11P29992 359 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 SP2Q02086 613 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 AP3B2Q13367 1082 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 GNPTABQ3T906 1256 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 CXCL17Q6UXB2 119 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 C7orf61Q8IZ16 206 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 NECAB1Q8N987 351 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 EMID1Q96A84 441 aaPredicted RBP17.38■□□□□ 0.37
ABCF3-208ENST00000471226 ANO3Q9BYT9 981 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 EHMT1Q9H9B1 1298 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
ABCF3-208ENST00000471226 POLR3EQ9NVU0 708 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 TMEM260Q9NX78 707 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 VPS54Q9P1Q0 977 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 STK36Q9NRP7 1315 aa17.38■□□□□ 0.37
ABCF3-208ENST00000471226 FIBPO43427 364 aa17.37■□□□□ 0.37
ABCF3-208ENST00000471226 CDK7P50613 346 aa17.37■□□□□ 0.37
ABCF3-208ENST00000471226 SEMA3FQ13275 785 aa17.37■□□□□ 0.37
ABCF3-208ENST00000471226 TRIM60Q495X7 471 aa17.37■□□□□ 0.37
ABCF3-208ENST00000471226 BRDTQ58F21 947 aaPredicted RBP17.37■□□□□ 0.37
ABCF3-208ENST00000471226 MYSM1Q5VVJ2 828 aa17.37■□□□□ 0.37
ABCF3-208ENST00000471226 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
ABCF3-208ENST00000471226 FAM177A1Q8N128 213 aaPredicted RBP17.37■□□□□ 0.37
ABCF3-208ENST00000471226 PGBD1Q96JS3 809 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms