RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
TOP3B-215ENST00000470338 CCND2P30279 289 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 MAGEA10P43363 369 aaPredicted RBP16.29■□□□□ 0.2
TOP3B-215ENST00000470338 CPT1AP50416 773 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 ANAPC15P60006 121 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 LY6KQ17RY6 165 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 CXCL17Q6UXB2 119 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 SLC43A3Q8NBI5 491 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 CUL5Q93034 780 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 VTI1AQ96AJ9 217 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 PDLIM7Q9NR12 457 aa16.29■□□□□ 0.2
TOP3B-215ENST00000470338 DDX41Q9UJV9 622 aaKnown RBP16.29■□□□□ 0.2
TOP3B-215ENST00000470338 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 ARVCFO00192 962 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 PDIA3P30101 505 aaKnown RBP16.28■□□□□ 0.2
TOP3B-215ENST00000470338 WWC2Q6AWC2 1192 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 KCNV1Q6PIU1 500 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 TEX2Q8IWB9 1127 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-215ENST00000470338 GPKOWQ92917 476 aaPredicted RBP eCLIP16.28■□□□□ 0.2
TOP3B-215ENST00000470338 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 SEZ6LQ9BYH1 1024 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
TOP3B-215ENST00000470338 POLR3EQ9NVU0 708 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 PRKAG2Q9UGJ0 569 aa16.28■□□□□ 0.2
TOP3B-215ENST00000470338 GRIN2DO15399 1336 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 MROH7Q68CQ1 1323 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 A0A1W2PPC1 479 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 TRIM43BA6NCK2 446 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 KPNA6O60684 536 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 PQBP1O60828 265 aaKnown RBP16.27■□□□□ 0.2
TOP3B-215ENST00000470338 STAM2O75886 525 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 GH1P01241 217 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 CLTBP09497 229 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 MRPS9P82933 396 aaKnown RBP16.27■□□□□ 0.2
TOP3B-215ENST00000470338 PURAQ00577 322 aaKnown RBP16.27■□□□□ 0.2
TOP3B-215ENST00000470338 ARHGAP1Q07960 439 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 FAAP100Q0VG06 881 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 NTRK3Q16288 839 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-215ENST00000470338 TYW1BQ6NUM6 668 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 SH3RF1Q7Z6J0 888 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-215ENST00000470338 TRIM43Q96BQ3 446 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-215ENST00000470338 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.2
TOP3B-215ENST00000470338 BARHL2Q9NY43 387 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
TOP3B-215ENST00000470338 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.19
TOP3B-215ENST00000470338 STXBP3O00186 592 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 KIAA0355O15063 1070 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 PRPF3O43395 683 aaKnown RBP16.26■□□□□ 0.19
TOP3B-215ENST00000470338 SEC24BO95487 1268 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 TGFB3P10600 412 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 ITGA7Q13683 1181 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
TOP3B-215ENST00000470338 PCNX4Q63HM2 1172 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 PPP1R18Q6NYC8 613 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 XRRA1Q6P2D8 792 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 INPP4AQ96PE3 977 aaPredicted RBP16.26■□□□□ 0.19
TOP3B-215ENST00000470338 ALDH8A1Q9H2A2 487 aaPredicted RBP16.26■□□□□ 0.19
TOP3B-215ENST00000470338 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 PCDH10Q9P2E7 1040 aa16.26■□□□□ 0.19
TOP3B-215ENST00000470338 CD4P01730 458 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 MYL3P08590 195 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 IFNAR1P17181 557 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 ICAM3P32942 547 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 NAPAP54920 295 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 MDM2Q00987 491 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-215ENST00000470338 PKN1Q16512 942 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 UBE2SQ16763 222 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 AFG1LQ8WV93 481 aa16.25■□□□□ 0.19
TOP3B-215ENST00000470338 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-215ENST00000470338 MTG1Q9BT17 334 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-215ENST00000470338 PRDM5Q9NQX1 630 aaPredicted RBP16.25■□□□□ 0.19
TOP3B-215ENST00000470338 SPATA31C2B4DYI2 1134 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 MMP3P08254 477 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 SCG2P13521 617 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 PSMC6P62333 389 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 CCT2P78371 535 aaKnown RBP16.24■□□□□ 0.19
TOP3B-215ENST00000470338 SP2Q02086 613 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 LAMC2Q13753 1193 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 CELF3Q5SZQ8 465 aaKnown RBP16.24■□□□□ 0.19
TOP3B-215ENST00000470338 MYSM1Q5VVJ2 828 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 LBHD1Q9BQE6 289 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-215ENST00000470338 RNF26Q9BY78 433 aaPredicted RBP16.24■□□□□ 0.19
TOP3B-215ENST00000470338 GLT8D2Q9H1C3 349 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 NCOA5Q9HCD5 579 aaKnown RBP16.24■□□□□ 0.19
TOP3B-215ENST00000470338 TMEM39AQ9NV64 488 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 TBX21Q9UL17 535 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 PCDHA6Q9UN73 950 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 PCDHA8Q9Y5H6 950 aa16.24■□□□□ 0.19
TOP3B-215ENST00000470338 SMCO2A6NFE2 343 aa16.23■□□□□ 0.19
TOP3B-215ENST00000470338 SPDYE3A6NKU9 549 aa16.23■□□□□ 0.19
TOP3B-215ENST00000470338 TLR3O15455 904 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms