RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 FKTNO75072 461 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 SNAI1O95863 264 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-209ENST00000470247 ITGB5P18084 799 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 MCM7P33993 719 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 SLC39A14Q15043 492 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 PWP2Q15269 919 aaKnown RBP12.8□□□□□ -0.36
SREBF1-209ENST00000470247 Q4G0T1 1027 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 XRRA1Q6P2D8 792 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 ZNF467Q7Z7K2 595 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-209ENST00000470247 DPP9Q86TI2 863 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 CD99L2Q8TCZ2 262 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 MAML3Q96JK9 1138 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-209ENST00000470247 MXRA8Q9BRK3 442 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 EHMT1Q9H9B1 1298 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 FLRT1Q9NZU1 646 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 MRVI1Q9Y6F6 885 aa12.8□□□□□ -0.36
SREBF1-209ENST00000470247 MORC2Q9Y6X9 1032 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-209ENST00000470247 PCNTO95613 3336 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 ZNF236Q9UL36 1845 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 CCNT1O60563 726 aaKnown RBP12.79□□□□□ -0.36
SREBF1-209ENST00000470247 MYCLP12524 364 aaPredicted RBP12.79□□□□□ -0.36
SREBF1-209ENST00000470247 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
SREBF1-209ENST00000470247 CYP2B6P20813 491 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 CCND2P30279 289 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 KRT85P78386 507 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 CEBPZQ03701 1054 aaKnown RBP12.79□□□□□ -0.36
SREBF1-209ENST00000470247 PRKCZQ05513 592 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 SEMA3FQ13275 785 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 IL17AQ16552 155 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 CCL14Q16627 93 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 CEP55Q53EZ4 464 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 LEO1Q8WVC0 666 aaPredicted RBP12.79□□□□□ -0.36
SREBF1-209ENST00000470247 SOCS4Q8WXH5 440 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 HAS1Q92839 578 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
SREBF1-209ENST00000470247 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 GDPD2Q9HCC8 539 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 KCNMB3Q9NPA1 279 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 JADE2Q9NQC1 790 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 TCHHQ07283 1943 aa12.79□□□□□ -0.36
SREBF1-209ENST00000470247 MGAMO43451 1857 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
SREBF1-209ENST00000470247 YEATS4O95619 227 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 ARP10275 920 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 XRCC5P13010 732 aaKnown RBP12.78□□□□□ -0.36
SREBF1-209ENST00000470247 RGS2P41220 211 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 FLT3LGP49771 235 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-209ENST00000470247 PTGDRQ13258 359 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 ORC2Q13416 577 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-209ENST00000470247 KIF22Q14807 665 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 STXBP2Q15833 593 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 PRR16Q569H4 304 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 ARMCX2Q7L311 632 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 NIPA1Q7RTP0 329 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 ETNPPLQ8TBG4 499 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 TINF2Q9BSI4 451 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 WDR11Q9BZH6 1224 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 SRRDQ9UH36 339 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 DDX25Q9UHL0 483 aaKnown RBP12.78□□□□□ -0.36
SREBF1-209ENST00000470247 CFAP45Q9UL16 551 aa12.78□□□□□ -0.36
SREBF1-209ENST00000470247 ASB14A6NK59 587 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 MSH4O15457 936 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 STAM2O75886 525 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 ICAM3P32942 547 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 ZNF76P36508 570 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 OLFML2BQ68BL8 750 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 PLA2G4DQ86XP0 818 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 MSL3Q8N5Y2 521 aaKnown RBP12.77□□□□□ -0.37
SREBF1-209ENST00000470247 GJA10Q969M2 543 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 ERO1AQ96HE7 468 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.37
SREBF1-209ENST00000470247 APBA2Q99767 749 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 KCNH7Q9NS40 1196 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 SLC5A4Q9NY91 659 aa12.77□□□□□ -0.37
SREBF1-209ENST00000470247 MYH15Q9Y2K3 1946 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 SPATA31C2B4DYI2 1134 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 SPTLC2O15270 562 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 DHX15O43143 795 aaKnown RBP12.76□□□□□ -0.37
SREBF1-209ENST00000470247 FIBPO43427 364 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 NEMFO60524 1076 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 ATP9AO75110 1047 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 PPP6R2O75170 966 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 BMP15O95972 392 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 GNRH1P01148 92 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 HSPA8P11142 646 aaKnown RBP12.76□□□□□ -0.37
SREBF1-209ENST00000470247 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-209ENST00000470247 GRIN1Q05586 938 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 PDE4DQ08499 809 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 IRF5Q13568 498 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 AXDND1Q5T1B0 1012 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-209ENST00000470247 TAPT1Q6NXT6 567 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 SLC5A5Q92911 643 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 GPRASP2Q96D09 838 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms