RNA–Protein interactions for RNA: ENST00000469956.1

LCK-209, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-209ENST00000469956 SEC63Q9UGP8 760 aaKnown RBP20.15■□□□□ 0.82
LCK-209ENST00000469956 LAMA2P24043 3122 aaKnown RBP20.15■□□□□ 0.82
LCK-209ENST00000469956 SORBS3O60504 671 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 B4GALT4O60513 344 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 GH1P01241 217 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 FPGSQ05932 587 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 KRT32Q14532 448 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 SAMD3Q8N6K7 520 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 AFG1LQ8WV93 481 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 MTG1Q9BT17 334 aaPredicted RBP20.14■□□□□ 0.81
LCK-209ENST00000469956 DDX41Q9UJV9 622 aaKnown RBP20.14■□□□□ 0.81
LCK-209ENST00000469956 SNX14Q9Y5W7 946 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 MRVI1Q9Y6F6 885 aa20.14■□□□□ 0.81
LCK-209ENST00000469956 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 UMODL1Q5DID0 1318 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 MMP3P08254 477 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 CYP2C18P33260 490 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 HSPA4P34932 840 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 BRDTQ58F21 947 aaPredicted RBP20.13■□□□□ 0.81
LCK-209ENST00000469956 USP17L6PQ6QN14 398 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 SYNE3Q6ZMZ3 975 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 Q7L0L9 218 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 VSIG10LQ86VR7 867 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 GPKOWQ92917 476 aaPredicted RBP eCLIP20.13■□□□□ 0.81
LCK-209ENST00000469956 KCNB2Q92953 911 aa20.13■□□□□ 0.81
LCK-209ENST00000469956 CCND2P30279 289 aa20.12■□□□□ 0.81
LCK-209ENST00000469956 CHMP4BP1P59074 171 aa20.12■□□□□ 0.81
LCK-209ENST00000469956 NBPF20Q3BBV1 942 aa20.12■□□□□ 0.81
LCK-209ENST00000469956 MFSD5Q6N075 450 aa20.12■□□□□ 0.81
LCK-209ENST00000469956 JAKMIP1Q96N16 626 aaKnown RBP20.12■□□□□ 0.81
LCK-209ENST00000469956 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
LCK-209ENST00000469956 TRMT13Q9NUP7 481 aaKnown RBP20.12■□□□□ 0.81
LCK-209ENST00000469956 PPP4R2Q9NY27 417 aa20.12■□□□□ 0.81
LCK-209ENST00000469956 FRMPD4Q14CM0 1322 aa20.11■□□□□ 0.81
LCK-209ENST00000469956 CNTNAP5Q8WYK1 1306 aa20.11■□□□□ 0.81
LCK-209ENST00000469956 KLF18A0A0U1RQI7 1052 aa20.11■□□□□ 0.81
LCK-209ENST00000469956 ZBTB43O43298 467 aa20.11■□□□□ 0.81
LCK-209ENST00000469956 CSF2RAP15509 400 aa20.11■□□□□ 0.81
LCK-209ENST00000469956 FAM47CQ5HY64 1035 aa20.11■□□□□ 0.81
LCK-209ENST00000469956 MEIS2O14770 477 aa20.1■□□□□ 0.81
LCK-209ENST00000469956 KPNA6O60684 536 aa20.1■□□□□ 0.81
LCK-209ENST00000469956 MRPS9P82933 396 aaKnown RBP20.1■□□□□ 0.81
LCK-209ENST00000469956 SP2Q02086 613 aa20.1■□□□□ 0.81
LCK-209ENST00000469956 RTN1Q16799 776 aa20.1■□□□□ 0.81
LCK-209ENST00000469956 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
LCK-209ENST00000469956 HIPK3Q9H422 1215 aa20.1■□□□□ 0.81
LCK-209ENST00000469956 NAP1L2Q9ULW6 460 aaPredicted RBP20.1■□□□□ 0.81
LCK-209ENST00000469956 GOLGA8AA7E2F4 631 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 GOLGA8BA8MQT2 603 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 HMGB1P09429 215 aaKnown RBP20.09■□□□□ 0.81
LCK-209ENST00000469956 ACRP10323 421 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 CYP2C9P11712 490 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 CCL23P55773 120 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 APOBRQ0VD83 1088 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 UBE2SQ16763 222 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 Q6ZUG5 572 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 C16orf59Q7L2K0 433 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 HEATR3Q7Z4Q2 680 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 DHX37Q8IY37 1157 aaKnown RBP20.09■□□□□ 0.81
LCK-209ENST00000469956 DEFB123Q8N688 67 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 CUL5Q93034 780 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 RNPC3Q96LT9 517 aaKnown RBP20.09■□□□□ 0.81
LCK-209ENST00000469956 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.09■□□□□ 0.81
LCK-209ENST00000469956 NOC4LQ9BVI4 516 aaKnown RBP20.09■□□□□ 0.81
LCK-209ENST00000469956 SEZ6LQ9BYH1 1024 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 BCAS3Q9H6U6 928 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 RBM28Q9NW13 759 aaKnown RBP20.09■□□□□ 0.81
LCK-209ENST00000469956 RTEL1Q9NZ71 1219 aa20.09■□□□□ 0.81
LCK-209ENST00000469956 PIK3CDO00329 1044 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 REC8O95072 547 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 GGPS1O95749 300 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 UBA1P22314 1058 aaKnown RBP20.08■□□□□ 0.81
LCK-209ENST00000469956 CDC27P30260 824 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 FGD1P98174 961 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 PPIGQ13427 754 aaKnown RBP eCLIP20.08■□□□□ 0.81
LCK-209ENST00000469956 BLOC1S2Q6QNY1 142 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 TMEM199Q8N511 208 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 KAT2BQ92831 832 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 EMID1Q96A84 441 aaPredicted RBP20.08■□□□□ 0.81
LCK-209ENST00000469956 WNT8AQ9H1J5 351 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 PSTPIP2Q9H939 334 aa20.08■□□□□ 0.81
LCK-209ENST00000469956 FAM217BQ9NTX9 383 aaPredicted RBP20.08■□□□□ 0.81
LCK-209ENST00000469956 SCN5AQ14524 2016 aa20.08■□□□□ 0.8
LCK-209ENST00000469956 ZNF286BP0CG31 522 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 FUT2Q10981 343 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 LAMC2Q13753 1193 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 HSDL1Q3SXM5 330 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 CELF3Q5SZQ8 465 aaKnown RBP20.07■□□□□ 0.8
LCK-209ENST00000469956 MYSM1Q5VVJ2 828 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 WWC2Q6AWC2 1192 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 GPR153Q6NV75 609 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 BRF1Q92994 677 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 TANC1Q9C0D5 1861 aa20.07■□□□□ 0.8
LCK-209ENST00000469956 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
LCK-209ENST00000469956 RPS6KB1P23443 525 aa20.06■□□□□ 0.8
LCK-209ENST00000469956 SEMA3FQ13275 785 aa20.06■□□□□ 0.8
LCK-209ENST00000469956 DGKDQ16760 1214 aa20.06■□□□□ 0.8
LCK-209ENST00000469956 TMEM240Q5SV17 173 aa20.06■□□□□ 0.8
LCK-209ENST00000469956 TYW1BQ6NUM6 668 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms