RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PCDHA6Q9UN73 950 aa15.45■□□□□ 0.06
GPC1-208ENST00000469694 CEP131Q9UPN4 1083 aa15.45■□□□□ 0.06
GPC1-208ENST00000469694 PCDHA8Q9Y5H6 950 aa15.45■□□□□ 0.06
GPC1-208ENST00000469694 GRIN2DO15399 1336 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 NT5C2P49902 561 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 IL17AQ16552 155 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 SYMPKQ92797 1274 aaKnown RBP15.44■□□□□ 0.06
GPC1-208ENST00000469694 TACO1Q9BSH4 297 aaKnown RBP15.44■□□□□ 0.06
GPC1-208ENST00000469694 IDI2Q9BXS1 227 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 AFMP43652 599 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 FKBP1AP62942 108 aaKnown RBP15.44■□□□□ 0.06
GPC1-208ENST00000469694 SEPT2Q15019 361 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 KLHL10Q6JEL2 608 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 GBP6Q6ZN66 633 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 RTKN2Q8IZC4 609 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 STAMQ92783 540 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 RRP36Q96EU6 259 aaKnown RBP15.44■□□□□ 0.06
GPC1-208ENST00000469694 CABS1Q96KC9 395 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 MMS19Q96T76 1030 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 SELENOOQ9BVL4 669 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 PI4KBQ9UBF8 816 aa15.44■□□□□ 0.06
GPC1-208ENST00000469694 PLIN4Q96Q06 1357 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 CCDC194A0A1B0GVG4 234 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 CALML3P27482 149 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 FNTAP49354 379 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 STX17P56962 302 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 SETQ01105 290 aaPredicted RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 RRP1BQ14684 758 aaKnown RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 CERKLQ49MI3 558 aaPredicted RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 SPATA1Q5VX52 437 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 CCNI2Q6ZMN8 369 aaPredicted RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 JPH2Q9BR39 696 aaPredicted RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 CAPN7Q9Y6W3 813 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 SMCO2A6NFE2 343 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 M0R2N6 131 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 EEF2P13639 858 aaKnown RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 HDLBPQ00341 1268 aaKnown RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 CCDC96Q2M329 555 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 RSBN1LQ6PCB5 846 aaPredicted RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 CTAGE1Q96RT6 745 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 MRIQ9BWK5 157 aa15.43■□□□□ 0.06
GPC1-208ENST00000469694 SEC63Q9UGP8 760 aaKnown RBP15.43■□□□□ 0.06
GPC1-208ENST00000469694 GOLGA6BA6NDN3 693 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 SMYD4Q8IYR2 804 aaPredicted RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 SPATA20Q8TB22 786 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 CSRNP1Q96S65 589 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 SH3GL2Q99962 352 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 RABEP2Q9H5N1 569 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 TMEM260Q9NX78 707 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 ATXN2Q99700 1313 aaKnown RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 ZMYND10O75800 440 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 MYBL2P10244 700 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 GNGT1P63211 74 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 ATP2C1P98194 919 aaPredicted RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 R3HDM1Q15032 1099 aaKnown RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 CYP26C1Q6V0L0 522 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 LZTS2Q9BRK4 669 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 SH3GLB2Q9NR46 395 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 BIN2Q9UBW5 565 aaPredicted RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 ITIH6Q6UXX5 1313 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 FILIP1LQ4L180 1135 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 CDKAL1Q5VV42 579 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 SIAH1Q8IUQ4 282 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 SLC16A10Q8TF71 515 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 RPGRIP1Q96KN7 1286 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 PSMD1Q99460 953 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 NUP88Q99567 741 aaPredicted RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 TMEM60Q9H2L4 133 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 DHX36Q9H2U1 1008 aaKnown RBP15.42■□□□□ 0.06
GPC1-208ENST00000469694 HDAC6Q9UBN7 1215 aa15.42■□□□□ 0.06
GPC1-208ENST00000469694 ZNF646O15015 1829 aaPredicted RBP15.41■□□□□ 0.06
GPC1-208ENST00000469694 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 ADGRF4Q8IZF3 695 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 SLF1Q9BQI6 1058 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 RIOX1Q9H6W3 641 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 VEZTQ9HBM0 779 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 ABHD10Q9NUJ1 306 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 SAMM50Q9Y512 469 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 USP17L10C9JJH3 530 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 MYO1FO00160 1098 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 ACTN4O43707 911 aaKnown RBP15.41■□□□□ 0.06
GPC1-208ENST00000469694 PPP1R11O60927 126 aaPredicted RBP15.41■□□□□ 0.06
GPC1-208ENST00000469694 FSBPO95073 299 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 SNHG28P0DPA3 235 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 SNAP25P60880 206 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 GSPT2Q8IYD1 628 aaKnown RBP15.41■□□□□ 0.06
GPC1-208ENST00000469694 ZNF579Q8NAF0 562 aaKnown RBP15.41■□□□□ 0.06
GPC1-208ENST00000469694 ZMYND12Q9H0C1 365 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 JMJD4Q9H9V9 463 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 PIM2Q9P1W9 311 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 SAR1BQ9Y6B6 198 aa15.41■□□□□ 0.06
GPC1-208ENST00000469694 PP2D1A8MPX8 630 aa15.4■□□□□ 0.06
GPC1-208ENST00000469694 ENC1O14682 589 aa15.4■□□□□ 0.06
GPC1-208ENST00000469694 B4GALNT4Q76KP1 1039 aa15.4■□□□□ 0.06
GPC1-208ENST00000469694 GMLQ99445 158 aa15.4■□□□□ 0.06
GPC1-208ENST00000469694 GUCA1BQ9UMX6 200 aa15.4■□□□□ 0.06
GPC1-208ENST00000469694 GH2P01242 217 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms