RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 ZDHHC15Q96MV8 337 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 ERGIC2Q96RQ1 377 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 NHEJ1Q9H9Q4 299 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-205ENST00000469687 HDAC6Q9UBN7 1215 aa16.36■□□□□ 0.21
CBWD3-205ENST00000469687 ATF5Q9Y2D1 282 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-205ENST00000469687 ZNF646O15015 1829 aaPredicted RBP16.35■□□□□ 0.21
CBWD3-205ENST00000469687 PLEKP08567 350 aaPredicted RBP16.35■□□□□ 0.21
CBWD3-205ENST00000469687 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
CBWD3-205ENST00000469687 CCDC122Q5T0U0 273 aa16.35■□□□□ 0.21
CBWD3-205ENST00000469687 CEP112Q8N8E3 955 aa16.35■□□□□ 0.21
CBWD3-205ENST00000469687 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
CBWD3-205ENST00000469687 PNKPQ96T60 521 aa16.35■□□□□ 0.21
CBWD3-205ENST00000469687 FGFBP2Q9BYJ0 223 aa16.35■□□□□ 0.21
CBWD3-205ENST00000469687 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
CBWD3-205ENST00000469687 MYO1AQ9UBC5 1043 aa16.35■□□□□ 0.21
CBWD3-205ENST00000469687 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 PPP1R2P41236 205 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 SLC1A4P43007 532 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 ZBED6P86452 979 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 CYP27A1Q02318 531 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 SEPT2Q15019 361 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 SIAH1Q8IUQ4 282 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 DNAJC19Q96DA6 116 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
CBWD3-205ENST00000469687 NUP58Q9BVL2 599 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 EHD4Q9H223 541 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 PCDHA12Q9UN75 941 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 DUSP10Q9Y6W6 482 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 MARCH6O60337 910 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 PDE6BP35913 854 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 TERF2Q15554 542 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 CERKLQ49MI3 558 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-205ENST00000469687 VWA3BQ502W6 1294 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 GUF1Q8N442 669 aaKnown RBP16.34■□□□□ 0.21
CBWD3-205ENST00000469687 CCDC155Q8N6L0 562 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 FAM207AQ9NSI2 230 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-205ENST00000469687 TBC1D7Q9P0N9 293 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 SIK3Q9Y2K2 1263 aa16.34■□□□□ 0.21
CBWD3-205ENST00000469687 NPHP3-ACAD11A0A0J9YXS1 232 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 E9PMD0 336 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 GDF11O95390 407 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 SSBP05455 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
CBWD3-205ENST00000469687 STAT3P40763 770 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
CBWD3-205ENST00000469687 COASYQ13057 564 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 CDC37Q16543 378 aaPredicted RBP16.33■□□□□ 0.2
CBWD3-205ENST00000469687 KRT26Q7Z3Y9 468 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 PODNQ7Z5L7 613 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 RETREG2Q8NC44 543 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 NOA1Q8NC60 698 aaKnown RBP16.33■□□□□ 0.2
CBWD3-205ENST00000469687 NDST4Q9H3R1 872 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 HAUS4Q9H6D7 363 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 MYO6Q9UM54 1294 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 POTEB3A0JP26 581 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 POTECB2RU33 542 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 ZNF263O14978 683 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 ATP1A1P05023 1023 aaKnown RBP16.33■□□□□ 0.2
CBWD3-205ENST00000469687 RHOXF2BP0C7M4 288 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 RAD51AP2Q09MP3 1159 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 DACT2Q5SW24 774 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 FKBP15Q5T1M5 1219 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 POTEBQ6S5H4 581 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 KIAA1328Q86T90 577 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 CCDC17Q96LX7 622 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 RHOXF2Q9BQY4 288 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 ARFGAP3Q9NP61 516 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 KIAA1024Q9UPX6 916 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 MYH10P35580 1976 aa16.33■□□□□ 0.2
CBWD3-205ENST00000469687 ECE2O60344 883 aa16.32■□□□□ 0.2
CBWD3-205ENST00000469687 SRGAP2O75044 1071 aa16.32■□□□□ 0.2
CBWD3-205ENST00000469687 JAG1P78504 1218 aa16.32■□□□□ 0.2
CBWD3-205ENST00000469687 JAKMIP2Q96AA8 810 aa16.32■□□□□ 0.2
CBWD3-205ENST00000469687 ZBTB9Q96C00 473 aa16.32■□□□□ 0.2
CBWD3-205ENST00000469687 ANO3Q9BYT9 981 aa16.32■□□□□ 0.2
CBWD3-205ENST00000469687 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
CBWD3-205ENST00000469687 PSMD14O00487 310 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 MEIS2O14770 477 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 MAN2A1Q16706 1144 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 LONRF2Q1L5Z9 754 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 TRAPPC11Q7Z392 1133 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 MKL1Q969V6 931 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 FUT8Q9BYC5 575 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 ZNHIT6Q9NWK9 470 aaKnown RBP16.31■□□□□ 0.2
CBWD3-205ENST00000469687 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 GCFC2P16383 781 aaKnown RBP16.31■□□□□ 0.2
CBWD3-205ENST00000469687 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
CBWD3-205ENST00000469687 KRT83P78385 493 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 ICA1Q05084 483 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 TUBB2AQ13885 445 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 WHAMMP3Q1A5X7 153 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 FIGNQ5HY92 759 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 TUBB2BQ9BVA1 445 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 KCNMB3Q9NPA1 279 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 PANK4Q9NVE7 773 aa16.31■□□□□ 0.2
CBWD3-205ENST00000469687 ARHGAP20Q9P2F6 1191 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms