RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 COL9A3Q14050 684 aaPredicted RBP16.43■□□□□ 0.22
CALCA-204ENST00000469608 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
CALCA-204ENST00000469608 NFXL1Q6ZNB6 911 aa16.43■□□□□ 0.22
CALCA-204ENST00000469608 FCHSD1Q86WN1 690 aa16.43■□□□□ 0.22
CALCA-204ENST00000469608 IL31RAQ8NI17 732 aa16.43■□□□□ 0.22
CALCA-204ENST00000469608 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
CALCA-204ENST00000469608 SCLYQ96I15 445 aa16.43■□□□□ 0.22
CALCA-204ENST00000469608 CDX2Q99626 313 aaPredicted RBP16.43■□□□□ 0.22
CALCA-204ENST00000469608 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
CALCA-204ENST00000469608 TRIP12Q14669 1992 aaPredicted RBP16.43■□□□□ 0.22
CALCA-204ENST00000469608 DOCK5Q9H7D0 1870 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 UNC80Q8N2C7 3258 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 GRXCR1A8MXD5 290 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 GCOM1H8Y6P7 765 aaPredicted RBP16.42■□□□□ 0.22
CALCA-204ENST00000469608 SH2B2O14492 632 aaPredicted RBP16.42■□□□□ 0.22
CALCA-204ENST00000469608 SORBS3O60504 671 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
CALCA-204ENST00000469608 DDAH1O94760 285 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 POLR2MP0CAP2 368 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 MCM5P33992 734 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 TRAF1Q13077 416 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 BMP2KLQ5H9B9 411 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 NFRKBQ6P4R8 1299 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 OTOP2Q7RTS6 562 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 MYLIPQ8WY64 445 aa16.42■□□□□ 0.22
CALCA-204ENST00000469608 CCDC69A6NI79 296 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 RXRAP19793 462 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 KIF5BP33176 963 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 PGM5Q15124 567 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 RASIP1Q5U651 963 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 RAB11FIP4Q86YS3 637 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 TIFAQ96CG3 184 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 ZFP91Q96JP5 570 aaPredicted RBP16.41■□□□□ 0.22
CALCA-204ENST00000469608 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 MTIF3Q9H2K0 278 aaKnown RBP16.41■□□□□ 0.22
CALCA-204ENST00000469608 CXXC1Q9P0U4 656 aaPredicted RBP16.41■□□□□ 0.22
CALCA-204ENST00000469608 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
CALCA-204ENST00000469608 NOD1Q9Y239 953 aa16.41■□□□□ 0.22
CALCA-204ENST00000469608 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
CALCA-204ENST00000469608 FGBP02675 491 aa16.4■□□□□ 0.22
CALCA-204ENST00000469608 ZNF286BP0CG31 522 aa16.4■□□□□ 0.22
CALCA-204ENST00000469608 CCND2P30279 289 aa16.4■□□□□ 0.22
CALCA-204ENST00000469608 PBX2P40425 430 aa16.4■□□□□ 0.22
CALCA-204ENST00000469608 DHX37Q8IY37 1157 aaKnown RBP16.4■□□□□ 0.22
CALCA-204ENST00000469608 HERVK_113Q902F9 699 aa16.4■□□□□ 0.22
CALCA-204ENST00000469608 RRP36Q96EU6 259 aaKnown RBP16.4■□□□□ 0.22
CALCA-204ENST00000469608 SPZ1Q9BXG8 430 aa16.4■□□□□ 0.22
CALCA-204ENST00000469608 MAP3K20Q9NYL2 800 aaKnown RBP16.4■□□□□ 0.22
CALCA-204ENST00000469608 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
CALCA-204ENST00000469608 TMEM265A0A087WTH1 108 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 ZBBXA8MT70 800 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 RGS20O76081 388 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 FOSL2P15408 326 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 CASTP20810 708 aaKnown RBP16.39■□□□□ 0.21
CALCA-204ENST00000469608 NECTIN1Q15223 517 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 DGKDQ16760 1214 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 DEFB128Q7Z7B8 93 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 CMTR1Q8N1G2 835 aaKnown RBP16.39■□□□□ 0.21
CALCA-204ENST00000469608 SAMD3Q8N6K7 520 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 KAT2BQ92831 832 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 TMEM87BQ96K49 555 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 PBX4Q9BYU1 374 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 PRUNE2Q8WUY3 3088 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 TET1Q8NFU7 2136 aa16.39■□□□□ 0.21
CALCA-204ENST00000469608 GGPS1O95749 300 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
CALCA-204ENST00000469608 PTPN11Q06124 597 aaPredicted RBP16.38■□□□□ 0.21
CALCA-204ENST00000469608 LAMC2Q13753 1193 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 PTGISQ16647 500 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 VSIG10LQ86VR7 867 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 RPUSD2Q8IZ73 545 aaKnown RBP16.38■□□□□ 0.21
CALCA-204ENST00000469608 MAFAQ8NHW3 353 aaPredicted RBP16.38■□□□□ 0.21
CALCA-204ENST00000469608 PPTC7Q8NI37 304 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 GPKOWQ92917 476 aaPredicted RBP eCLIP16.38■□□□□ 0.21
CALCA-204ENST00000469608 EMID1Q96A84 441 aaPredicted RBP16.38■□□□□ 0.21
CALCA-204ENST00000469608 MAP3K14Q99558 947 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
CALCA-204ENST00000469608 hCG_1642624A0A1W2PR95 340 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 CDC45O75419 566 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 PSEN2P49810 448 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 GNAQP50148 359 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 GRIN2CQ14957 1233 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 RNF20Q5VTR2 975 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
CALCA-204ENST00000469608 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 TMTC2Q8N394 836 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
CALCA-204ENST00000469608 RETREG2Q8NC44 543 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 SMARCC2Q8TAQ2 1214 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 VWCEQ96DN2 955 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 SPATA33Q96N06 139 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 ZNF576Q9H609 170 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 SLC12A7Q9Y666 1083 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 CHD9Q3L8U1 2897 aa16.37■□□□□ 0.21
CALCA-204ENST00000469608 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
CALCA-204ENST00000469608 CALM1P0DP23 149 aa16.36■□□□□ 0.21
CALCA-204ENST00000469608 CALM2P0DP24 149 aa16.36■□□□□ 0.21
CALCA-204ENST00000469608 CALM3P0DP25 149 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms