RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 TAPT1Q6NXT6 567 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 NOL8Q76FK4 1167 aaKnown RBP9.8□□□□□ -0.84
SSBP1-208ENST00000469123 UBE2Q1Q7Z7E8 422 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 FBXO16Q8IX29 292 aaPredicted RBP9.8□□□□□ -0.84
SSBP1-208ENST00000469123 REXO1Q8N1G1 1221 aaKnown RBP9.8□□□□□ -0.84
SSBP1-208ENST00000469123 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 TBC1D5Q92609 795 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 WDR11Q9BZH6 1224 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 AP5M1Q9H0R1 490 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 BRMS1Q9HCU9 246 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 COL20A1Q9P218 1284 aa9.8□□□□□ -0.84
SSBP1-208ENST00000469123 GNEQ9Y223 722 aaKnown RBP9.8□□□□□ -0.84
SSBP1-208ENST00000469123 KPNA6O60684 536 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 CAPN15O75808 1086 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 ICAM3P32942 547 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 CLK2P49760 499 aaKnown RBP9.79□□□□□ -0.84
SSBP1-208ENST00000469123 CPT1AP50416 773 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 MLLT1Q03111 559 aaPredicted RBP9.79□□□□□ -0.84
SSBP1-208ENST00000469123 LRRC41Q15345 812 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 USP17L6PQ6QN14 398 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 TLK2Q86UE8 772 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 NLRX1Q86UT6 975 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 GIMAP8Q8ND71 665 aaPredicted RBP9.79□□□□□ -0.84
SSBP1-208ENST00000469123 EMID1Q96A84 441 aaPredicted RBP9.79□□□□□ -0.84
SSBP1-208ENST00000469123 GPRASP2Q96D09 838 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 INPP4AQ96PE3 977 aaPredicted RBP9.79□□□□□ -0.84
SSBP1-208ENST00000469123 PURBQ96QR8 312 aaKnown RBP9.79□□□□□ -0.84
SSBP1-208ENST00000469123 C11orf49Q9H6J7 331 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 ORC3Q9UBD5 711 aaPredicted RBP9.79□□□□□ -0.84
SSBP1-208ENST00000469123 PCDHA6Q9UN73 950 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 PCDHA8Q9Y5H6 950 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 MRVI1Q9Y6F6 885 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 SYNRGQ9UMZ2 1314 aa9.79□□□□□ -0.84
SSBP1-208ENST00000469123 FIBPO43427 364 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 ADAMTS4O75173 837 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 GH1P01241 217 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 C6orf222P0C671 652 aaPredicted RBP9.78□□□□□ -0.84
SSBP1-208ENST00000469123 TXNP10599 105 aaKnown RBP9.78□□□□□ -0.84
SSBP1-208ENST00000469123 MYCLP12524 364 aaPredicted RBP9.78□□□□□ -0.84
SSBP1-208ENST00000469123 SMPD1P17405 629 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 SREBF1P36956 1147 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 ADCYAP1R1P41586 468 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 NLRP5P59047 1200 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 TRIM29Q14134 588 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 NEDD9Q14511 834 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 C1orf53Q5VUE5 145 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 EEPD1Q7L9B9 569 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 NIPA1Q7RTP0 329 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 NSUN7Q8NE18 718 aaKnown RBP9.78□□□□□ -0.84
SSBP1-208ENST00000469123 KLHDC9Q8NEP7 349 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 SENP7Q9BQF6 1050 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 LARP6Q9BRS8 491 aaKnown RBP9.78□□□□□ -0.84
SSBP1-208ENST00000469123 ANO3Q9BYT9 981 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 PCDHA4Q9UN74 947 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 PHF24Q9UPV7 400 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 ELP1O95163 1332 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
SSBP1-208ENST00000469123 CTDNEP1O95476 244 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 PGK1P00558 417 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 CYP3A4P08684 503 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 COL6A1P12109 1028 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 SETQ01105 290 aaPredicted RBP9.77□□□□□ -0.85
SSBP1-208ENST00000469123 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 FSCN1Q16658 493 aaKnown RBP9.77□□□□□ -0.85
SSBP1-208ENST00000469123 UBE2SQ16763 222 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 GNASQ5JWF2 1037 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 CCDC62Q6P9F0 684 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 SEPT14Q6ZU15 432 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 BLIDQ8IZY5 108 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 OR6J1Q8NGC5 347 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 PPTC7Q8NI37 304 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 GLT1D1Q96MS3 346 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 NAP1L4Q99733 375 aaKnown RBP9.77□□□□□ -0.85
SSBP1-208ENST00000469123 ALG1Q9BT22 464 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 VPS54Q9P1Q0 977 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.77□□□□□ -0.85
SSBP1-208ENST00000469123 MROH7Q68CQ1 1323 aa9.77□□□□□ -0.85
SSBP1-208ENST00000469123 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 DYNC1LI2O43237 492 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 LARGE1O95461 756 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 CIITAP33076 1130 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 MNX1P50219 401 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 USP11P51784 963 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 MRPS9P82933 396 aaKnown RBP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 MTMR1Q13613 665 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 SAFBQ15424 915 aaKnown RBP eCLIP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 CEP55Q53EZ4 464 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 CCSAPQ6IQ19 270 aaPredicted RBP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 MOXD1Q6UVY6 613 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 METTL7BQ6UX53 244 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 CCDC83Q8IWF9 413 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 NECAB1Q8N987 351 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 FAM184AQ8NB25 1140 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 PAWRQ96IZ0 340 aaKnown RBP9.76□□□□□ -0.85
SSBP1-208ENST00000469123 PHF20Q9BVI0 1012 aa9.76□□□□□ -0.85
SSBP1-208ENST00000469123 JADE2Q9NQC1 790 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms