RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 CASP1P29466 404 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 SEMA3FQ13275 785 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 KARSQ15046 597 aaKnown RBP9.34□□□□□ -0.91
BRCA1-208ENST00000468300 SLC30A10Q6XR72 485 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 IL31RAQ8NI17 732 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 BTBD7Q9P203 1132 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 MYPNQ86TC9 1320 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CXCL11O14625 94 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 CCDC192P0DO97 292 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 TXKP42681 527 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 OAZ1P54368 228 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 IQCB1Q15051 598 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 ANO6Q4KMQ2 910 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 MCTP2Q6DN12 878 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-208ENST00000468300 RNF214Q8ND24 703 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 SYTL5Q8TDW5 730 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-208ENST00000468300 ANP32BQ92688 251 aaKnown RBP9.33□□□□□ -0.92
BRCA1-208ENST00000468300 DHX58Q96C10 678 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 PNMA5Q96PV4 448 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 PCDHA5Q9Y5H7 936 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 POTEMA6NI47 508 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 FDX1P10109 184 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 DPCR1Q3MIW9 517 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 LBX2Q6XYB7 198 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 FCHSD1Q86WN1 690 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 CNNM3Q8NE01 707 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 MS4A4AQ96JQ5 239 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 TRERF1Q96PN7 1200 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 UIMC1Q96RL1 719 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 SDF4Q9BRK5 362 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 DISC1Q9NRI5 854 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 TMOD4Q9NZQ9 345 aa9.33□□□□□ -0.92
BRCA1-208ENST00000468300 ASTN1O14525 1302 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 MSH4O15457 936 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 ALAS1P13196 640 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 DPYDQ12882 1025 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 GRB10Q13322 594 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 PDIA5Q14554 519 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 POSTNQ15063 836 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 AK8Q96MA6 479 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 DNAJC25Q9H1X3 360 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 TTC12Q9H892 705 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-208ENST00000468300 VAV3Q9UKW4 847 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 SPDYE3A6NKU9 549 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 ZBED4O75132 1171 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 RPS6P62753 249 aaKnown RBP9.32□□□□□ -0.92
BRCA1-208ENST00000468300 UBXN2AP68543 259 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 MRPS9P82933 396 aaKnown RBP9.32□□□□□ -0.92
BRCA1-208ENST00000468300 TRAF1Q13077 416 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 DHX40Q8IX18 779 aaKnown RBP9.32□□□□□ -0.92
BRCA1-208ENST00000468300 CBX8Q9HC52 389 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 HOMER2Q9NSB8 354 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 CLEC11AQ9Y240 323 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 UNCXA6NJT0 531 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 ITGB5P18084 799 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 NF2P35240 595 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 SNRNP48Q6IEG0 339 aaKnown RBP9.32□□□□□ -0.92
BRCA1-208ENST00000468300 B3GNT9Q6UX72 402 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 ARMC9Q7Z3E5 817 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 TAAR1Q96RJ0 339 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 MED15Q96RN5 788 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 HSD3B7Q9H2F3 369 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 TXNRD2Q9NNW7 524 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 BLOC1S4Q9NUP1 217 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 HOXC10Q9NYD6 342 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 AGTPBP1Q9UPW5 1226 aa9.32□□□□□ -0.92
BRCA1-208ENST00000468300 KIAA1217Q5T5P2 1943 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 PRR16Q569H4 304 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 L1TD1Q5T7N2 865 aaKnown RBP9.31□□□□□ -0.92
BRCA1-208ENST00000468300 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 LUZP1Q86V48 1076 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 ASCC2Q9H1I8 757 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-208ENST00000468300 KBTBD4Q9NVX7 518 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 MAP3K20Q9NYL2 800 aaKnown RBP9.31□□□□□ -0.92
BRCA1-208ENST00000468300 MAN1B1Q9UKM7 699 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 MEIS1O00470 390 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 TBX3O15119 743 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 PLCG1P19174 1290 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 STAT3P40763 770 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 MORC3Q14149 939 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 TMEM119Q4V9L6 283 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 HYIQ5T013 277 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 SAMD3Q8N6K7 520 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 STAMQ92783 540 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 NAP1L4Q99733 375 aaKnown RBP9.31□□□□□ -0.92
BRCA1-208ENST00000468300 RNF146Q9NTX7 359 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 WDR81Q562E7 1941 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 DOCK5Q9H7D0 1870 aa9.31□□□□□ -0.92
BRCA1-208ENST00000468300 BIN1O00499 593 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 ARP10275 920 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 NLRP12P59046 1061 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 CUL4BQ13620 913 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 TTLL12Q14166 644 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-208ENST00000468300 PGM5Q15124 567 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 STX1AQ16623 288 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 ISM2Q6H9L7 571 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 SASS6Q6UVJ0 657 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 GADL1Q6ZQY3 521 aa9.3□□□□□ -0.92
BRCA1-208ENST00000468300 CABP7Q86V35 215 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms