RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
PCOLCE-204ENST00000468214 WDR11Q9BZH6 1224 aa17.02■□□□□ 0.32
PCOLCE-204ENST00000468214 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
PCOLCE-204ENST00000468214 ZEB2O60315 1214 aa17.01■□□□□ 0.31
PCOLCE-204ENST00000468214 BMP8BP34820 402 aa17.01■□□□□ 0.31
PCOLCE-204ENST00000468214 FSCN1Q16658 493 aaKnown RBP17.01■□□□□ 0.31
PCOLCE-204ENST00000468214 WWC2Q6AWC2 1192 aa17.01■□□□□ 0.31
PCOLCE-204ENST00000468214 CCSAPQ6IQ19 270 aaPredicted RBP17.01■□□□□ 0.31
PCOLCE-204ENST00000468214 SYTL5Q8TDW5 730 aaPredicted RBP17.01■□□□□ 0.31
PCOLCE-204ENST00000468214 TBC1D5Q92609 795 aa17.01■□□□□ 0.31
PCOLCE-204ENST00000468214 ELP1O95163 1332 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 A0A0U1RQG5 324 aaPredicted RBP17■□□□□ 0.31
PCOLCE-204ENST00000468214 DCDC2CA8MYV0 355 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 hCG_1984214I3L0E3 225 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 SCG2P13521 617 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 PTGS1P23219 599 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 EDNRBP24530 442 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 ST3GAL1Q11201 340 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 PFKFB3Q16875 520 aaPredicted RBP17■□□□□ 0.31
PCOLCE-204ENST00000468214 DUSP28Q4G0W2 176 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 DNAH12Q6ZR08 3092 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 ZNF713Q8N859 430 aaPredicted RBP17■□□□□ 0.31
PCOLCE-204ENST00000468214 NSUN6Q8TEA1 469 aaKnown RBP17■□□□□ 0.31
PCOLCE-204ENST00000468214 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 RMDN3Q96TC7 470 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 PDLIM7Q9NR12 457 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 Q9Y3F1 56 aa17■□□□□ 0.31
PCOLCE-204ENST00000468214 STK36Q9NRP7 1315 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 OPLAHO14841 1288 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 CTAGE5O15320 804 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 DEXIO95424 95 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 CLTBP09497 229 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 NAPAP54920 295 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 PKN1Q16512 942 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 ARHGEF16Q5VV41 709 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 CXCL17Q6UXB2 119 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 SCFD2Q8WU76 684 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 COL20A1Q9P218 1284 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 DOCK5Q9H7D0 1870 aa16.99■□□□□ 0.31
PCOLCE-204ENST00000468214 MROH7Q68CQ1 1323 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 STXBP3O00186 592 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 DTNBO60941 627 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 CABYRO75952 493 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 EIF2AK2P19525 551 aaKnown RBP16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 NKX3-2P78367 333 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 TTLL4Q14679 1199 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 STXBP2Q15833 593 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 TMEM63BQ5T3F8 832 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 PPP1R18Q6NYC8 613 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 TDHQ8IZJ6 230 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 NSUN7Q8NE18 718 aaKnown RBP16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 OR6J1Q8NGC5 347 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 TMX3Q96JJ7 454 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 IWS1Q96ST2 819 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 TMEM39AQ9NV64 488 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
PCOLCE-204ENST00000468214 RBM47A0AV96 593 aaKnown RBP16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 NKRFO15226 690 aaKnown RBP eCLIP16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 HSD17B4P51659 736 aa16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 TYW1BQ6NUM6 668 aa16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 ANKRD33Q7Z3H0 272 aa16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 TOX2Q96NM4 488 aa16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 ORC3Q9UBD5 711 aaPredicted RBP16.97■□□□□ 0.31
PCOLCE-204ENST00000468214 TRIM43BA6NCK2 446 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 ARVCFO00192 962 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 JAK2O60674 1132 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 TXNP10599 105 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 RAG1P15918 1043 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 HOXA13P31271 388 aaPredicted RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 CPT1AP50416 773 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 GHRHRQ02643 423 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 SEPT14Q6ZU15 432 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 BADQ92934 168 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 CUL5Q93034 780 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 TRIM43Q96BQ3 446 aaPredicted RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 LLPHQ9BRT6 129 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 PSTPIP2Q9H939 334 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 PXMP2Q9NR77 195 aa16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 MAP3K20Q9NYL2 800 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-204ENST00000468214 LTBP2Q14767 1821 aa16.96■□□□□ 0.3
PCOLCE-204ENST00000468214 NR3C2P08235 984 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 ADCY7P51828 1080 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 FCHSD1Q86WN1 690 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 CCDC148Q8NFR7 591 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 SMARCC2Q8TAQ2 1214 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 WASF1Q92558 559 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 AIFM3Q96NN9 605 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 POLR3EQ9NVU0 708 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
PCOLCE-204ENST00000468214 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
PCOLCE-204ENST00000468214 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms