RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 OPLAHO14841 1288 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 FLOT1O75955 427 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 CFBP00751 764 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 RPA1P27694 616 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 INPP5BP32019 993 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 EPS15P42566 896 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 IREB2P48200 963 aaKnown RBP11.41□□□□□ -0.58
MSH5-213ENST00000468136 SPP2Q13103 211 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 GRB10Q13322 594 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 COG2Q14746 738 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 CEP55Q53EZ4 464 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 PRR16Q569H4 304 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 CCDC174Q6PII3 467 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 GRAMD1CQ8IYS0 662 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 CCDC112Q8NEF3 446 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.41□□□□□ -0.58
MSH5-213ENST00000468136 RIT2Q99578 217 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 MTRQ99707 1265 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 TANGO6Q9C0B7 1094 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 TUFT1Q9NNX1 390 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 EMILIN3Q9NT22 766 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 ADAMTS5Q9UNA0 930 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 CSADQ9Y600 493 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 ATAD5Q96QE3 1844 aa11.41□□□□□ -0.58
MSH5-213ENST00000468136 FRMPD4Q14CM0 1322 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 IQCA1LA6NCM1 817 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 LRRC10BA6NIK2 292 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 MAFGO15525 162 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 KLRC4O43908 158 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 DSG3P32926 999 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 COPB2P35606 906 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
MSH5-213ENST00000468136 KCNJ6P48051 423 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 ASIC1P78348 528 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 PPP2R5CQ13362 524 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 MTMR2Q13614 643 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 ZYXQ15942 572 aaKnown RBP11.4□□□□□ -0.58
MSH5-213ENST00000468136 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 ISM2Q6H9L7 571 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 MB21D1Q8N884 522 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 PNMA5Q96PV4 448 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 XPO4Q9C0E2 1151 aaKnown RBP11.4□□□□□ -0.58
MSH5-213ENST00000468136 RPAP3Q9H6T3 665 aaPredicted RBP11.4□□□□□ -0.58
MSH5-213ENST00000468136 FANCLQ9NW38 375 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 IFNKQ9P0W0 207 aa11.4□□□□□ -0.58
MSH5-213ENST00000468136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.4□□□□□ -0.58
MSH5-213ENST00000468136 SBF1O95248 1867 aa11.4□□□□□ -0.59
MSH5-213ENST00000468136 ZNF536O15090 1300 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 RPTORQ8N122 1335 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
MSH5-213ENST00000468136 PP2D1A8MPX8 630 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 MEIS1O00470 390 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 VWA5AO00534 786 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 CXCL11O14625 94 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 STAM2O75886 525 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 TPM2P07951 284 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 EEF1GP26641 437 aaKnown RBP11.39□□□□□ -0.59
MSH5-213ENST00000468136 CDC25AP30304 524 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 HIRAP54198 1017 aaPredicted RBP11.39□□□□□ -0.59
MSH5-213ENST00000468136 CDKAL1Q5VV42 579 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 C9orf131Q5VYM1 1079 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 CCDC186Q7Z3E2 898 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 CCDC65Q8IXS2 484 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 SPC24Q8NBT2 197 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 NELFBQ8WX92 580 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 LENG9Q96B70 501 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 IQCDQ96DY2 449 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 GLIS2Q9BZE0 524 aaPredicted RBP11.39□□□□□ -0.59
MSH5-213ENST00000468136 HSD3B7Q9H2F3 369 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 BLZF1Q9H2G9 400 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 THAP9Q9H5L6 903 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 BLOC1S4Q9NUP1 217 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 KCND2Q9NZV8 630 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 DNM3Q9UQ16 869 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 AFG3L2Q9Y4W6 797 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 ZHX2Q9Y6X8 837 aa11.39□□□□□ -0.59
MSH5-213ENST00000468136 ASTN2O75129 1339 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 IGLV3-22A0A075B6J6 115 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 A0A1B0GTH6 734 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 POTEMA6NI47 508 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 FAM86B1E9PN63 330 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 MSH4O15457 936 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 CCP110O43303 1012 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 USP2O75604 605 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 TUBB4AP04350 444 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 FAM86B2P0C5J1 330 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 CCNE1P24864 410 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
MSH5-213ENST00000468136 LRRC63Q05C16 580 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 PPATQ06203 517 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.59
MSH5-213ENST00000468136 PDE4DQ08499 809 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 SPIRE1Q08AE8 756 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 TRIM14Q14142 442 aa11.38□□□□□ -0.59
MSH5-213ENST00000468136 PCNX4Q63HM2 1172 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms