RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 SEPT14Q6ZU15 432 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 SH3RF1Q7Z6J0 888 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 FAM126BQ8IXS8 530 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 CCDC82Q8N4S0 544 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 OR6J1Q8NGC5 347 aa17.49■□□□□ 0.39
ATG4B-215ENST00000468018 EMID1Q96A84 441 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-215ENST00000468018 TRIM43Q96BQ3 446 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-215ENST00000468018 hCG_1642624A0A1W2PR95 340 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 KIAA0355O15063 1070 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 CLTBP09497 229 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 ITGB8P26012 769 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 CPT1AP50416 773 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 FXR1P51114 621 aaKnown RBP eCLIP17.48■□□□□ 0.39
ATG4B-215ENST00000468018 MRPS9P82933 396 aaKnown RBP17.48■□□□□ 0.39
ATG4B-215ENST00000468018 PURAQ00577 322 aaKnown RBP17.48■□□□□ 0.39
ATG4B-215ENST00000468018 TOB2Q14106 344 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-215ENST00000468018 WWC2Q6AWC2 1192 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 TYW1BQ6NUM6 668 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 FCHSD1Q86WN1 690 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 TEX2Q8IWB9 1127 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 SEZ6LQ9BYH1 1024 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 TBX21Q9UL17 535 aa17.48■□□□□ 0.39
ATG4B-215ENST00000468018 hCG_1984214I3L0E3 225 aa17.47■□□□□ 0.39
ATG4B-215ENST00000468018 PQBP1O60828 265 aaKnown RBP17.47■□□□□ 0.39
ATG4B-215ENST00000468018 CD4P01730 458 aa17.47■□□□□ 0.39
ATG4B-215ENST00000468018 ADD1P35611 737 aaKnown RBP17.47■□□□□ 0.39
ATG4B-215ENST00000468018 METAP2P50579 478 aaKnown RBP eCLIP17.47■□□□□ 0.39
ATG4B-215ENST00000468018 NTRK3Q16288 839 aa17.47■□□□□ 0.39
ATG4B-215ENST00000468018 LY6KQ17RY6 165 aa17.47■□□□□ 0.39
ATG4B-215ENST00000468018 ZNF713Q8N859 430 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-215ENST00000468018 POLR3EQ9NVU0 708 aa17.47■□□□□ 0.39
ATG4B-215ENST00000468018 CCDC196A0A1B0GTZ2 297 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 STAM2O75886 525 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 GH1P01241 217 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 MYCLP12524 364 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-215ENST00000468018 HOXD8P13378 290 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-215ENST00000468018 CCND2P30279 289 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 ICAM3P32942 547 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 FGD1P98174 961 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 MDM2Q00987 491 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-215ENST00000468018 ITGA7Q13683 1181 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 PPP1R18Q6NYC8 613 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 KCNV1Q6PIU1 500 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 GPKOWQ92917 476 aaPredicted RBP eCLIP17.46■□□□□ 0.39
ATG4B-215ENST00000468018 INPP4AQ96PE3 977 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-215ENST00000468018 PSTPIP2Q9H939 334 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 PRKAG2Q9UGJ0 569 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 V9GY48 417 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-215ENST00000468018 SZT2Q5T011 3432 aa17.46■□□□□ 0.39
ATG4B-215ENST00000468018 DCDC2CA8MYV0 355 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 KPNA6O60684 536 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 MMP3P08254 477 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 TGFB3P10600 412 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 PDIA3P30101 505 aaKnown RBP17.45■□□□□ 0.38
ATG4B-215ENST00000468018 ANAPC15P60006 121 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 SP2Q02086 613 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 PCNX4Q63HM2 1172 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 SMARCC2Q8TAQ2 1214 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 CUL5Q93034 780 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 CYP46A1Q9Y6A2 500 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 MRVI1Q9Y6F6 885 aa17.45■□□□□ 0.38
ATG4B-215ENST00000468018 TRIP12Q14669 1992 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-215ENST00000468018 STXBP3O00186 592 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 PSMC6P62333 389 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 SEMA3FQ13275 785 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 PKN1Q16512 942 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 PFKFB3Q16875 520 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-215ENST00000468018 BRDTQ58F21 947 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-215ENST00000468018 MYSM1Q5VVJ2 828 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 XRRA1Q6P2D8 792 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 HEATR3Q7Z4Q2 680 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 TDHQ8IZJ6 230 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 AFG1LQ8WV93 481 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 MTG1Q9BT17 334 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-215ENST00000468018 UPF3BQ9BZI7 483 aaKnown RBP17.44■□□□□ 0.38
ATG4B-215ENST00000468018 RIC8AQ9NPQ8 531 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 PRDM5Q9NQX1 630 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-215ENST00000468018 TANC1Q9C0D5 1861 aa17.44■□□□□ 0.38
ATG4B-215ENST00000468018 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
ATG4B-215ENST00000468018 SLC34A2O95436 690 aa17.43■□□□□ 0.38
ATG4B-215ENST00000468018 UBA1P22314 1058 aaKnown RBP17.43■□□□□ 0.38
ATG4B-215ENST00000468018 CLK2P49760 499 aaKnown RBP17.43■□□□□ 0.38
ATG4B-215ENST00000468018 LAMC2Q13753 1193 aa17.43■□□□□ 0.38
ATG4B-215ENST00000468018 PPTC7Q8NI37 304 aa17.43■□□□□ 0.38
ATG4B-215ENST00000468018 BADQ92934 168 aa17.43■□□□□ 0.38
ATG4B-215ENST00000468018 VTI1AQ96AJ9 217 aa17.43■□□□□ 0.38
ATG4B-215ENST00000468018 UBE2OQ9C0C9 1292 aaKnown RBP17.43■□□□□ 0.38
ATG4B-215ENST00000468018 ALDH8A1Q9H2A2 487 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-215ENST00000468018 TMEM39AQ9NV64 488 aa17.43■□□□□ 0.38
ATG4B-215ENST00000468018 ESYT2A0FGR8 921 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 SPATA31C2B4DYI2 1134 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 B4GALT4O60513 344 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 TIMP1P01033 207 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 MYL3P08590 195 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 IFNAR1P17181 557 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 UBE2SQ16763 222 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 LRIT3Q3SXY7 679 aa17.42■□□□□ 0.38
ATG4B-215ENST00000468018 CELF3Q5SZQ8 465 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms