RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 CDK7P50613 346 aa21.47■■□□□ 1.03
YBX1-204ENST00000467957 TLE2Q04725 743 aa21.47■■□□□ 1.03
YBX1-204ENST00000467957 KCNV1Q6PIU1 500 aa21.47■■□□□ 1.03
YBX1-204ENST00000467957 CHRDL2Q6WN34 429 aa21.47■■□□□ 1.03
YBX1-204ENST00000467957 GPKOWQ92917 476 aaPredicted RBP eCLIP21.47■■□□□ 1.035e-8■■■□□ 19.1
YBX1-204ENST00000467957 DDX41Q9UJV9 622 aaKnown RBP21.47■■□□□ 1.03
YBX1-204ENST00000467957 A0A0U1RQG5 324 aaPredicted RBP21.46■■□□□ 1.03
YBX1-204ENST00000467957 A6NJR5 290 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 RGS20O76081 388 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 BRDTQ58F21 947 aaPredicted RBP21.46■■□□□ 1.03
YBX1-204ENST00000467957 XRRA1Q6P2D8 792 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 CXCL17Q6UXB2 119 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 COPS5Q92905 334 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 ZNF274Q96GC6 653 aaPredicted RBP21.46■■□□□ 1.03
YBX1-204ENST00000467957 GDF15Q99988 308 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 SEZ6LQ9BYH1 1024 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 ALDH8A1Q9H2A2 487 aaPredicted RBP21.46■■□□□ 1.03
YBX1-204ENST00000467957 PDRG1Q9NUG6 133 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 POLR3EQ9NVU0 708 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 BARHL2Q9NY43 387 aa21.46■■□□□ 1.03
YBX1-204ENST00000467957 RBM27Q9P2N5 1060 aaKnown RBP21.46■■□□□ 1.03
YBX1-204ENST00000467957 STXBP3O00186 592 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 ARVCFO00192 962 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 GH1P01241 217 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 BMP8BP34820 402 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 ARHGAP1Q07960 439 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 NTRK3Q16288 839 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 PFKFB3Q16875 520 aaPredicted RBP21.45■■□□□ 1.02
YBX1-204ENST00000467957 LY6KQ17RY6 165 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 TYW1BQ6NUM6 668 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 SLC43A3Q8NBI5 491 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 VTI1AQ96AJ9 217 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 MRVI1Q9Y6F6 885 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 MROH7Q68CQ1 1323 aa21.45■■□□□ 1.02
YBX1-204ENST00000467957 PRPF3O43395 683 aaKnown RBP21.44■■□□□ 1.02
YBX1-204ENST00000467957 KPNA6O60684 536 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 SEC24BO95487 1268 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 TGFB3P10600 412 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 IFNAR1P17181 557 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 NAPAP54920 295 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 MRPS9P82933 396 aaKnown RBP21.44■■□□□ 1.02
YBX1-204ENST00000467957 PCNX4Q63HM2 1172 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 EMID1Q96A84 441 aaPredicted RBP21.44■■□□□ 1.02
YBX1-204ENST00000467957 PDLIM7Q9NR12 457 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 PRKAG2Q9UGJ0 569 aa21.44■■□□□ 1.02
YBX1-204ENST00000467957 PQBP1O60828 265 aaKnown RBP21.43■■□□□ 1.02
YBX1-204ENST00000467957 CLTBP09497 229 aa21.43■■□□□ 1.02
YBX1-204ENST00000467957 SCG2P13521 617 aa21.43■■□□□ 1.02
YBX1-204ENST00000467957 MAGEA10P43363 369 aaPredicted RBP21.43■■□□□ 1.02
YBX1-204ENST00000467957 PURAQ00577 322 aaKnown RBP21.43■■□□□ 1.02
YBX1-204ENST00000467957 HABP4Q5JVS0 413 aaKnown RBP21.43■■□□□ 1.02
YBX1-204ENST00000467957 INPP4AQ96PE3 977 aaPredicted RBP21.43■■□□□ 1.02
YBX1-204ENST00000467957 RNF26Q9BY78 433 aaPredicted RBP21.43■■□□□ 1.02
YBX1-204ENST00000467957 GLT8D2Q9H1C3 349 aa21.43■■□□□ 1.02
YBX1-204ENST00000467957 RIC8AQ9NPQ8 531 aa21.43■■□□□ 1.02
YBX1-204ENST00000467957 A0A1W2PPC1 479 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 DCDC2CA8MYV0 355 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 GRIN2DO15399 1336 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 ICAM3P32942 547 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 CCT2P78371 535 aaKnown RBP21.42■■□□□ 1.02
YBX1-204ENST00000467957 FAAP100Q0VG06 881 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 ITGA7Q13683 1181 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 LAMC2Q13753 1193 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 LTBP2Q14767 1821 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 PKN1Q16512 942 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 UBE2SQ16763 222 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 GNPTABQ3T906 1256 aa21.42■■□□□ 1.02
YBX1-204ENST00000467957 MTG1Q9BT17 334 aaPredicted RBP21.42■■□□□ 1.02
YBX1-204ENST00000467957 TRIM43BA6NCK2 446 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 SPDYE3A6NKU9 549 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 KIAA0355O15063 1070 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 MYL3P08590 195 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 ADCY7P51828 1080 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 C8orf34Q49A92 452 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 SH3RF1Q7Z6J0 888 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 FAM126BQ8IXS8 530 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 AFG1LQ8WV93 481 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 PHKBQ93100 1093 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 TRIM43Q96BQ3 446 aaPredicted RBP21.41■■□□□ 1.02
YBX1-204ENST00000467957 NCOA5Q9HCD5 579 aaKnown RBP21.41■■□□□ 1.02
YBX1-204ENST00000467957 PRDM5Q9NQX1 630 aaPredicted RBP21.41■■□□□ 1.02
YBX1-204ENST00000467957 PCDHA6Q9UN73 950 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 PCDHA8Q9Y5H6 950 aa21.41■■□□□ 1.02
YBX1-204ENST00000467957 ESYT2A0FGR8 921 aa21.4■■□□□ 1.02
YBX1-204ENST00000467957 SMCO2A6NFE2 343 aa21.4■■□□□ 1.02
YBX1-204ENST00000467957 SPATA31C2B4DYI2 1134 aa21.4■■□□□ 1.02
YBX1-204ENST00000467957 FOSP01100 380 aaPredicted RBP21.4■■□□□ 1.02
YBX1-204ENST00000467957 MMP3P08254 477 aa21.4■■□□□ 1.02
YBX1-204ENST00000467957 AKAP17AQ02040 695 aaKnown RBP21.4■■□□□ 1.02
YBX1-204ENST00000467957 CELF3Q5SZQ8 465 aaKnown RBP21.4■■□□□ 1.02
YBX1-204ENST00000467957 MYSM1Q5VVJ2 828 aa21.4■■□□□ 1.02
YBX1-204ENST00000467957 DHX37Q8IY37 1157 aaKnown RBP21.4■■□□□ 1.02
YBX1-204ENST00000467957 ZFP91Q96JP5 570 aaPredicted RBP21.4■■□□□ 1.02
YBX1-204ENST00000467957 LBHD1Q9BQE6 289 aaPredicted RBP21.4■■□□□ 1.02
YBX1-204ENST00000467957 EHMT1Q9H9B1 1298 aa21.4■■□□□ 1.02
YBX1-204ENST00000467957 TLR3O15455 904 aaKnown RBP21.39■■□□□ 1.01
YBX1-204ENST00000467957 FIBPO43427 364 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 CD4P01730 458 aa21.39■■□□□ 1.01
YBX1-204ENST00000467957 UBA1P22314 1058 aaKnown RBP21.39■■□□□ 1.01
YBX1-204ENST00000467957 SP2Q02086 613 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms