RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.174e-9■■□□□ 13.6
SEC16A-208ENST00000467838 PPP4CP60510 307 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 TTC31Q49AM3 519 aaPredicted RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 PDXDC1Q6P996 788 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 DZIP1Q86YF9 867 aaKnown RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 EEF2KMTQ96G04 330 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 CALML4Q96GE6 196 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 MTMR9Q96QG7 549 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 C6orf50Q9HD87 102 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 RNF14Q9UBS8 474 aa16.09■□□□□ 0.17
SEC16A-208ENST00000467838 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
SEC16A-208ENST00000467838 A6NNZ2 444 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 EIF3HO15372 352 aaKnown RBP eCLIP16.08■□□□□ 0.16
SEC16A-208ENST00000467838 TSPY3P0CV98 308 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 TSPY8P0CW00 308 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 NAPAP54920 295 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 LETM2Q2VYF4 491 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 TUBB8Q3ZCM7 444 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 SV2BQ7L1I2 683 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 PACS2Q86VP3 889 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 SYN2Q92777 582 aaPredicted RBP16.08■□□□□ 0.16
SEC16A-208ENST00000467838 RRP36Q96EU6 259 aaKnown RBP16.08■□□□□ 0.16
SEC16A-208ENST00000467838 ZFP91Q96JP5 570 aaPredicted RBP16.08■□□□□ 0.16
SEC16A-208ENST00000467838 TLR10Q9BXR5 811 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 LY75O60449 1722 aa16.08■□□□□ 0.16
SEC16A-208ENST00000467838 ATXN2Q99700 1313 aaKnown RBP16.08■□□□□ 0.16
SEC16A-208ENST00000467838 A0A087WUV0 522 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-208ENST00000467838 MYMKA6NI61 221 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 LRRC53A6NM62 1247 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 RASA1P20936 1047 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 HGSNATQ68CP4 663 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-208ENST00000467838 PNMA5Q96PV4 448 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 CAPS2Q9BXY5 557 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 FAM207AQ9NSI2 230 aaPredicted RBP16.07■□□□□ 0.16
SEC16A-208ENST00000467838 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 CNTNAP4Q9C0A0 1308 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 AKR1B10O60218 316 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 TADA2BQ86TJ2 420 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 PROM2Q8N271 834 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 HPS3Q969F9 1004 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 MKNK2Q9HBH9 465 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 SLC39A2Q9NP94 309 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 SALL4Q9UJQ4 1053 aa16.07■□□□□ 0.16
SEC16A-208ENST00000467838 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 RXRBP28702 533 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 TECP42680 631 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 MAGEA1P43355 309 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 NOVP48745 357 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 APBA1Q02410 837 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 EMC10Q5UCC4 262 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 KLHDC7AQ5VTJ3 777 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 MREGQ8N565 214 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 TSEN2Q8NCE0 465 aaKnown RBP16.06■□□□□ 0.16
SEC16A-208ENST00000467838 SH3RF3Q8TEJ3 882 aaPredicted RBP16.06■□□□□ 0.16
SEC16A-208ENST00000467838 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
SEC16A-208ENST00000467838 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 NOX5Q96PH1 765 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 NUCKS1Q9H1E3 243 aaKnown RBP16.06■□□□□ 0.16
SEC16A-208ENST00000467838 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 PLEKHA4Q9H4M7 779 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 PSMD2Q13200 908 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 TMEM119Q4V9L6 283 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 ZCWPW2Q504Y3 356 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 TTMPQ5BVD1 217 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 CCDC181Q5TID7 509 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 RRAGAQ7L523 313 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 TBCKQ8TEA7 893 aa16.06■□□□□ 0.16
SEC16A-208ENST00000467838 EP400Q96L91 3159 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 TRIM37O94972 964 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 GSTO1P78417 241 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 C8orf74Q6P047 294 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 TXNRD3Q86VQ6 643 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
SEC16A-208ENST00000467838 REXO1Q8N1G1 1221 aaKnown RBP16.05■□□□□ 0.16
SEC16A-208ENST00000467838 C1orf131Q8NDD1 294 aaKnown RBP16.05■□□□□ 0.16
SEC16A-208ENST00000467838 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 RAD54LQ92698 747 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 RBM12Q9NTZ6 932 aaKnown RBP16.05■□□□□ 0.16
SEC16A-208ENST00000467838 CEP72Q9P209 647 aa16.05■□□□□ 0.16
SEC16A-208ENST00000467838 TAF1LQ8IZX4 1826 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 GRID2IPA4D2P6 1211 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 ZEB2O60315 1214 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 CD302Q8IX05 232 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 NEDD1Q8NHV4 660 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 DRC1Q96MC2 740 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 LRRC27Q9C0I9 530 aa16.04■□□□□ 0.16
SEC16A-208ENST00000467838 MMRN2Q9H8L6 949 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms