RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	KLRF2	D3W0D1	207 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	DYNC1LI2	O43237	492 aa	Predicted RBP	13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	PQBP1	O60828	265 aa	Known RBP	13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	ITGB8	P26012	769 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	BEX3	Q00994	111 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	FAAP100	Q0VG06	881 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	DUSP28	Q4G0W2	176 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	TMEM63B	Q5T3F8	832 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	FBXO11	Q86XK2	927 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	MCF2L2	Q86YR7	1114 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	MTMR8	Q96EF0	704 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	MPHOSPH6	Q99547	160 aa	Known RBP	13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	RNF26	Q9BY78	433 aa	Predicted RBP	13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	VAT1L	Q9HCJ6	419 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	MRPL11	Q9Y3B7	192 aa	Known RBP	13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	DNAH12	Q6ZR08	3092 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	MROH7	Q68CQ1	1323 aa		13.86	□□□□□ -0.19
CTNS-205	ENST00000467663	LTBP2	Q14767	1821 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663		A0A0U1RQG5	324 aa	Predicted RBP	13.85	□□□□□ -0.19
CTNS-205	ENST00000467663		B4DLN1	442 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	ARVCF	O00192	962 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	STX6	O43752	255 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	CABYR	O75952	493 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	PTGS1	P23219	599 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	MRPL12	P52815	198 aa	Known RBP	13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	PDE4D	Q08499	809 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	SSRP1	Q08945	709 aa	Known RBP	13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	GRM4	Q14833	912 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	NTRK3	Q16288	839 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	FSCN1	Q16658	493 aa	Known RBP	13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	LARP1B	Q659C4	914 aa	Known RBP	13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	SLC43A3	Q8NBI5	491 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	TBC1D5	Q92609	795 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	AMN	Q9BXJ7	453 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	WDR11	Q9BZH6	1224 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	SENP2	Q9HC62	589 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	FOXD4L1	Q9NU39	408 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	TMEM39A	Q9NV64	488 aa		13.85	□□□□□ -0.19
CTNS-205	ENST00000467663	ZBTB5	O15062	677 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	ZEB2	O60315	1214 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	DEXI	O95424	95 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	CTDNEP1	O95476	244 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	BRD1	O95696	1058 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	RAG1	P15918	1043 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	XBP1	P17861	261 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	SYT1	P21579	422 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	AKAP17A	Q02040	695 aa	Known RBP	13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	GHRHR	Q02643	423 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	SLC35G1	Q2M3R5	365 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	CXCL17	Q6UXB2	119 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	CLEC17A	Q6ZS10	378 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	VTI1A	Q96AJ9	217 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	RIOX1	Q9H6W3	641 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	NCOA5	Q9HCD5	579 aa	Known RBP	13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	ORC3	Q9UBD5	711 aa	Predicted RBP	13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	TBX21	Q9UL17	535 aa		13.84	□□□□□ -0.19
CTNS-205	ENST00000467663	OPLAH	O14841	1288 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	NKRF	O15226	690 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	PRPF3	O43395	683 aa	Known RBP	13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	PPP1R11	O60927	126 aa	Predicted RBP	13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	CDC27	P30260	824 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	ADD1	P35611	737 aa	Known RBP	13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	SHH	Q15465	462 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	TMTC3	Q6ZXV5	915 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	FAM126B	Q8IXS8	530 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	NSUN6	Q8TEA1	469 aa	Known RBP	13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	SCFD2	Q8WU76	684 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	GBP4	Q96PP9	640 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	TAAR1	Q96RJ0	339 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	SEZ6L	Q9BYH1	1024 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	COL20A1	Q9P218	1284 aa		13.83	□□□□□ -0.2
CTNS-205	ENST00000467663	TIMP1	P01033	207 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	CD4	P01730	458 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	PTMS	P20962	102 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	HSD17B4	P51659	736 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	ITGA7	Q13683	1181 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	C9orf50	Q5SZB4	431 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	SAMD3	Q8N6K7	520 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	IWS1	Q96ST2	819 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	MAP3K20	Q9NYL2	800 aa	Known RBP	13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	PCDHA1	Q9Y5I3	950 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663	GRIN2D	O15399	1336 aa		13.82	□□□□□ -0.2
CTNS-205	ENST00000467663		H3BQV1	296 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	TLR3	O15455	904 aa	Known RBP	13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	CYTH3	O43739	400 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	JAK2	O60674	1132 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	ZSCAN22	P10073	491 aa	Predicted RBP	13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	CPT1A	P50416	773 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	FPGS	Q05932	587 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	TRAF1	Q13077	416 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	TRIM29	Q14134	588 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	CCDC62	Q6P9F0	684 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	OR6J1	Q8NGC5	347 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	PIGS	Q96S52	555 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	RMDN3	Q96TC7	470 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	MYL10	Q9BUA6	226 aa		13.81	□□□□□ -0.2
CTNS-205	ENST00000467663	SPZ1	Q9BXG8	430 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms