RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 CTDNEP1O95476 244 aa29.83■■■□□ 2.37
PDCD4-205ENST00000467574 CCND2P30279 289 aa29.83■■■□□ 2.37
PDCD4-205ENST00000467574 SEPT14Q6ZU15 432 aa29.83■■■□□ 2.37
PDCD4-205ENST00000467574 GTF3C6Q969F1 213 aa29.83■■■□□ 2.37
PDCD4-205ENST00000467574 BACH2Q9BYV9 841 aa29.83■■■□□ 2.37
PDCD4-205ENST00000467574 ZMYND12Q9H0C1 365 aa29.83■■■□□ 2.37
PDCD4-205ENST00000467574 DOCK5Q9H7D0 1870 aa29.82■■■□□ 2.37
PDCD4-205ENST00000467574 ADAMTS3O15072 1205 aa29.82■■■□□ 2.36
PDCD4-205ENST00000467574 CLK2P49760 499 aaKnown RBP29.82■■■□□ 2.36
PDCD4-205ENST00000467574 SSRP1Q08945 709 aaKnown RBP29.82■■■□□ 2.36
PDCD4-205ENST00000467574 ST3GAL1Q11201 340 aa29.82■■■□□ 2.36
PDCD4-205ENST00000467574 TTLL4Q14679 1199 aa29.82■■■□□ 2.36
PDCD4-205ENST00000467574 CPLX2Q6PUV4 134 aaKnown RBP29.82■■■□□ 2.36
PDCD4-205ENST00000467574 TRIM22Q8IYM9 498 aa29.82■■■□□ 2.36
PDCD4-205ENST00000467574 NECAB1Q8N987 351 aa29.82■■■□□ 2.36
PDCD4-205ENST00000467574 COPS5Q92905 334 aa29.82■■■□□ 2.36
PDCD4-205ENST00000467574 TSEN34Q9BSV6 310 aaKnown RBP29.82■■■□□ 2.36
PDCD4-205ENST00000467574 SENP6Q9GZR1 1112 aaPredicted RBP29.82■■■□□ 2.36
PDCD4-205ENST00000467574 UPF2Q9HAU5 1272 aaKnown RBP29.82■■■□□ 2.36
PDCD4-205ENST00000467574 DYNC1LI2O43237 492 aaPredicted RBP29.81■■■□□ 2.36
PDCD4-205ENST00000467574 KCNA10Q16322 511 aa29.81■■■□□ 2.36
PDCD4-205ENST00000467574 ZFP91Q96JP5 570 aaPredicted RBP29.81■■■□□ 2.36
PDCD4-205ENST00000467574 SPC25Q9HBM1 224 aa29.81■■■□□ 2.36
PDCD4-205ENST00000467574 STK36Q9NRP7 1315 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 NKRFO15226 690 aaKnown RBP eCLIP29.8■■■□□ 2.36
PDCD4-205ENST00000467574 DEXIO95424 95 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 TXNP10599 105 aaKnown RBP29.8■■■□□ 2.36
PDCD4-205ENST00000467574 BEX3Q00994 111 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 FSCN1Q16658 493 aaKnown RBP29.8■■■□□ 2.36
PDCD4-205ENST00000467574 LRRC26Q2I0M4 334 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 PCNX4Q63HM2 1172 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 GLT8D2Q9H1C3 349 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 VPS54Q9P1Q0 977 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 PCDHA6Q9UN73 950 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 PCDHA8Q9Y5H6 950 aa29.8■■■□□ 2.36
PDCD4-205ENST00000467574 A0A1W2PQ45 241 aaPredicted RBP29.79■■■□□ 2.36
PDCD4-205ENST00000467574 A0A1W2PQY0 241 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 SPDYE3A6NKU9 549 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 DTNBO60941 627 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 CDKL5O76039 1030 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 ACLYP53396 1101 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 RABEP1Q15276 862 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 GNASQ5JWF2 1037 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 CCDC12Q8WUD4 166 aaPredicted RBP29.79■■■□□ 2.36
PDCD4-205ENST00000467574 FERMT2Q96AC1 680 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 AIFM3Q96NN9 605 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 INPP4AQ96PE3 977 aaPredicted RBP29.79■■■□□ 2.36
PDCD4-205ENST00000467574 AP5M1Q9H0R1 490 aa29.79■■■□□ 2.36
PDCD4-205ENST00000467574 DDX41Q9UJV9 622 aaKnown RBP29.79■■■□□ 2.36
PDCD4-205ENST00000467574 MOXD2PA6NHM9 499 aa29.78■■■□□ 2.36
PDCD4-205ENST00000467574 SNX17Q15036 470 aa29.78■■■□□ 2.36
PDCD4-205ENST00000467574 LY6KQ17RY6 165 aa29.78■■■□□ 2.36
PDCD4-205ENST00000467574 XRRA1Q6P2D8 792 aa29.78■■■□□ 2.36
PDCD4-205ENST00000467574 SH3GLB2Q9NR46 395 aa29.78■■■□□ 2.36
PDCD4-205ENST00000467574 TMEM260Q9NX78 707 aa29.78■■■□□ 2.36
PDCD4-205ENST00000467574 LIMCH1Q9UPQ0 1083 aa29.78■■■□□ 2.36
PDCD4-205ENST00000467574 SCN10AQ9Y5Y9 1956 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 STAM2O75886 525 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 ASGR1P07306 291 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 ARHGAP1Q07960 439 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 SEMA3FQ13275 785 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 PCSK9Q8NBP7 692 aaKnown RBP29.77■■■□□ 2.36
PDCD4-205ENST00000467574 CCDC148Q8NFR7 591 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 OR6J1Q8NGC5 347 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 PGBD1Q96JS3 809 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 ANO3Q9BYT9 981 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 MRVI1Q9Y6F6 885 aa29.77■■■□□ 2.36
PDCD4-205ENST00000467574 ATN1P54259 1190 aaPredicted RBP29.76■■■□□ 2.35
PDCD4-205ENST00000467574 AP3B2Q13367 1082 aa29.76■■■□□ 2.35
PDCD4-205ENST00000467574 DPF3Q92784 378 aa29.76■■■□□ 2.35
PDCD4-205ENST00000467574 C6orf50Q9HD87 102 aa29.76■■■□□ 2.35
PDCD4-205ENST00000467574 FOSP01100 380 aaPredicted RBP29.75■■■□□ 2.35
PDCD4-205ENST00000467574 SLC39A5Q6ZMH5 540 aa29.75■■■□□ 2.35
PDCD4-205ENST00000467574 NSUN7Q8NE18 718 aaKnown RBP29.75■■■□□ 2.35
PDCD4-205ENST00000467574 RTEL1Q9NZ71 1219 aa29.75■■■□□ 2.35
PDCD4-205ENST00000467574 UBA1P22314 1058 aaKnown RBP29.74■■■□□ 2.35
PDCD4-205ENST00000467574 ICAM3P32942 547 aa29.74■■■□□ 2.35
PDCD4-205ENST00000467574 SP2Q02086 613 aa29.74■■■□□ 2.35
PDCD4-205ENST00000467574 NPY5RQ15761 445 aa29.74■■■□□ 2.35
PDCD4-205ENST00000467574 REXO1Q8N1G1 1221 aaKnown RBP29.74■■■□□ 2.35
PDCD4-205ENST00000467574 EMID1Q96A84 441 aaPredicted RBP29.74■■■□□ 2.35
PDCD4-205ENST00000467574 A6NJR5 290 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 GH1P01241 217 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 FDPSP14324 419 aaKnown RBP29.73■■■□□ 2.35
PDCD4-205ENST00000467574 GNA11P29992 359 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 SREBF1P36956 1147 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 C1orf53Q5VUE5 145 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 JAKMIP3Q5VZ66 844 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 KCNV1Q6PIU1 500 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 CRYGNQ8WXF5 182 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 EHMT1Q9H9B1 1298 aa29.73■■■□□ 2.35
PDCD4-205ENST00000467574 SPATA31C2B4DYI2 1134 aa29.72■■■□□ 2.35
PDCD4-205ENST00000467574 EVI5O60447 810 aa29.72■■■□□ 2.35
PDCD4-205ENST00000467574 TGFB3P10600 412 aa29.72■■■□□ 2.35
PDCD4-205ENST00000467574 ITGB5P18084 799 aa29.72■■■□□ 2.35
PDCD4-205ENST00000467574 CPT1AP50416 773 aa29.72■■■□□ 2.35
PDCD4-205ENST00000467574 GNPTABQ3T906 1256 aa29.72■■■□□ 2.35
PDCD4-205ENST00000467574 CXCL17Q6UXB2 119 aa29.72■■■□□ 2.35
PDCD4-205ENST00000467574 FAM177A1Q8N128 213 aaPredicted RBP29.72■■■□□ 2.35
PDCD4-205ENST00000467574 RASGRP4Q8TDF6 673 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms