RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZNF618Q5T7W0 954 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 ERC1Q8IUD2 1116 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 DBF4BQ8NFT6 615 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-203ENST00000467533 MKL1Q969V6 931 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 ASIC4Q96FT7 647 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
HDAC3-203ENST00000467533 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 IL1RAPL2Q9NP60 686 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 MTMR4Q9NYA4 1195 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 GTF2IRD1Q9UHL9 959 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 EXOC6BQ9Y2D4 811 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 MYO15AQ9UKN7 3530 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 EMSYQ7Z589 1322 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 GALR2O43603 387 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-203ENST00000467533 PRDM1O75626 825 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 MMP3P08254 477 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 NBL1P41271 181 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 SLC1A4P43007 532 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 PTK7Q13308 1070 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 MBTPS1Q14703 1052 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 ZNF444Q8N0Y2 327 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-203ENST00000467533 C7orf31Q8N865 590 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 C11orf84Q9BUA3 381 aaPredicted RBP12.17□□□□□ -0.46
HDAC3-203ENST00000467533 INCENPQ9NQS7 918 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 PAG1Q9NWQ8 432 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 HDAC6Q9UBN7 1215 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 DCHS1Q96JQ0 3298 aa12.17□□□□□ -0.46
HDAC3-203ENST00000467533 MED19A0JLT2 244 aaPredicted RBP12.16□□□□□ -0.46
HDAC3-203ENST00000467533 GRM6O15303 877 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 CHGBP05060 677 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 CALML3P27482 149 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 NUBP1P53384 320 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 SBK1Q52WX2 424 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 TRAF7Q6Q0C0 670 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 SLC30A10Q6XR72 485 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 KCTD1Q719H9 257 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 ADSSL1Q8N142 457 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 FIBCD1Q8N539 461 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 TMEM57Q8N5G2 664 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 AFG1LQ8WV93 481 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 WNT8BQ93098 351 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 NKD2Q969F2 451 aaPredicted RBP12.16□□□□□ -0.46
HDAC3-203ENST00000467533 GMCL1Q96IK5 515 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 IFIH1Q9BYX4 1025 aaKnown RBP12.16□□□□□ -0.46
HDAC3-203ENST00000467533 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
HDAC3-203ENST00000467533 MYO7AQ13402 2215 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 PTPRZ1P23471 2315 aaPredicted RBP12.15□□□□□ -0.46
HDAC3-203ENST00000467533 NFIBO00712 420 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 ARIH2O95376 493 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 ICAM1P05362 532 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 MCCP23508 829 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 CBX2Q14781 532 aaPredicted RBP12.15□□□□□ -0.46
HDAC3-203ENST00000467533 TRIM71Q2Q1W2 868 aaKnown RBP12.15□□□□□ -0.46
HDAC3-203ENST00000467533 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 FRMD5Q7Z6J6 570 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 TRMT2AQ8IZ69 625 aaKnown RBP12.15□□□□□ -0.46
HDAC3-203ENST00000467533 KAT2BQ92831 832 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 MSLNLQ96KJ4 702 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 RPGRIP1Q96KN7 1286 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 KATNAL1Q9BW62 490 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 PLIN4Q96Q06 1357 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
HDAC3-203ENST00000467533 FAM186AA6NE01 2351 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 KIAA1671Q9BY89 1806 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 C5orf67F2Z3F1 127 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 PLA2G6O60733 806 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 EYA4O95677 639 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 PDGFBP01127 241 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-203ENST00000467533 RB1P06400 928 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 TSPY3P0CV98 308 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 TSPY8P0CW00 308 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
HDAC3-203ENST00000467533 PSEN2P49810 448 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 RRP1P56182 461 aaKnown RBP12.14□□□□□ -0.47
HDAC3-203ENST00000467533 ADAM15Q13444 863 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 PLEKHG4Q58EX7 1191 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 ZBTB33Q86T24 672 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 SMRP1Q8NCR6 262 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 TOP1MTQ969P6 601 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
HDAC3-203ENST00000467533 RWDD3Q9Y3V2 267 aa12.14□□□□□ -0.47
HDAC3-203ENST00000467533 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-203ENST00000467533 KIAA1217Q5T5P2 1943 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 RSPH10B2B2RC85 870 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 GH1P01241 217 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 MMP1P03956 469 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 IFIT2P09913 472 aaKnown RBP12.13□□□□□ -0.47
HDAC3-203ENST00000467533 RSPH10BP0C881 870 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 ICAM3P32942 547 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 THPOP40225 353 aa12.13□□□□□ -0.47
HDAC3-203ENST00000467533 MFSD10Q14728 455 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms