RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 NR3C2P08235 984 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 IQCF3P0C7M6 154 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 EIF2AK2P19525 551 aaKnown RBP16.74■□□□□ 0.27
RB1-202ENST00000467505 GHRHRQ02643 423 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 ARHGAP1Q07960 439 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 SEC23AQ15436 765 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 PTGISQ16647 500 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 LY6KQ17RY6 165 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 TJAP1Q5JTD0 557 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 AFAP1L1Q8TED9 768 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 EMID1Q96A84 441 aaPredicted RBP16.74■□□□□ 0.27
RB1-202ENST00000467505 FTOQ9C0B1 505 aaKnown RBP eCLIP16.74■□□□□ 0.27
RB1-202ENST00000467505 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
RB1-202ENST00000467505 YBX2Q9Y2T7 364 aaKnown RBP16.74■□□□□ 0.27
RB1-202ENST00000467505 PCDHA1Q9Y5I3 950 aa16.74■□□□□ 0.27
RB1-202ENST00000467505 TRIP12Q14669 1992 aaPredicted RBP16.74■□□□□ 0.27
RB1-202ENST00000467505 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
RB1-202ENST00000467505 BAIAP3O94812 1187 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 IGFBP4P22692 258 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 HSD17B4P51659 736 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
RB1-202ENST00000467505 STAG2Q8N3U4 1231 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 C7orf31Q8N865 590 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 NCOA7Q8NI08 942 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 ATXN2LQ8WWM7 1075 aaKnown RBP16.73■□□□□ 0.27
RB1-202ENST00000467505 PPM1EQ8WY54 764 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 THEGQ9P2T0 379 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 MAD2L2Q9UI95 211 aa16.73■□□□□ 0.27
RB1-202ENST00000467505 DDX41Q9UJV9 622 aaKnown RBP16.73■□□□□ 0.27
RB1-202ENST00000467505 PRUNE2Q8WUY3 3088 aa16.72■□□□□ 0.27
RB1-202ENST00000467505 PALM3A6NDB9 673 aaPredicted RBP16.72■□□□□ 0.27
RB1-202ENST00000467505 KCNJ6P48051 423 aa16.72■□□□□ 0.27
RB1-202ENST00000467505 RABGGTBP53611 331 aa16.72■□□□□ 0.27
RB1-202ENST00000467505 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
RB1-202ENST00000467505 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
RB1-202ENST00000467505 PPTC7Q8NI37 304 aa16.72■□□□□ 0.27
RB1-202ENST00000467505 MTMR8Q96EF0 704 aa16.72■□□□□ 0.27
RB1-202ENST00000467505 CYP21A2P08686 494 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 TGFB3P10600 412 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 MYCLP12524 364 aaPredicted RBP16.71■□□□□ 0.27
RB1-202ENST00000467505 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
RB1-202ENST00000467505 GRM4Q14833 912 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 WTAPQ15007 396 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 STOX1Q6ZVD7 989 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 HOMER1Q86YM7 354 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 IL27Q8NEV9 243 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 PDCD2LQ9BRP1 358 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 GTF2IRD1Q9UHL9 959 aa16.71■□□□□ 0.27
RB1-202ENST00000467505 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
RB1-202ENST00000467505 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
RB1-202ENST00000467505 POLR2MP0CAP2 368 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 SELPP16109 830 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 CHMLP26374 656 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 PDE4AP27815 886 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 CCND2P30279 289 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 PSEN2P49810 448 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 ADGRE1Q14246 886 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 GDF6Q6KF10 455 aaPredicted RBP16.7■□□□□ 0.26
RB1-202ENST00000467505 CATIPQ7Z7H3 387 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 VWCEQ96DN2 955 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 IL25Q9H293 177 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
RB1-202ENST00000467505 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 OPLAHO14841 1288 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 GTPBP6O43824 516 aaPredicted RBP16.69■□□□□ 0.26
RB1-202ENST00000467505 PPFIA4O75335 1185 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 F2P00734 622 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 CA3P07451 260 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 RBL2Q08999 1139 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 PGM5Q15124 567 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 GNPTABQ3T906 1256 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 LRRC8DQ7L1W4 858 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 PPP1R13LQ8WUF5 828 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 KAT2BQ92831 832 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 PIGSQ96S52 555 aa16.69■□□□□ 0.26
RB1-202ENST00000467505 E7EWF7 191 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 EFCAB14O75071 495 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 STAM2O75886 525 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 MYOGP15173 224 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 HOXA13P31271 388 aaPredicted RBP16.68■□□□□ 0.26
RB1-202ENST00000467505 MRPS5P82675 430 aaKnown RBP16.68■□□□□ 0.26
RB1-202ENST00000467505 MFSD10Q14728 455 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 CCDC85BQ15834 202 aaPredicted RBP16.68■□□□□ 0.26
RB1-202ENST00000467505 KIAA0753Q2KHM9 967 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 VSIG10LQ86VR7 867 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 HERC6Q8IVU3 1022 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 SPATA33Q96N06 139 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 MLXIPQ9HAP2 919 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 HDAC6Q9UBN7 1215 aa16.68■□□□□ 0.26
RB1-202ENST00000467505 TET1Q8NFU7 2136 aa16.67■□□□□ 0.26
RB1-202ENST00000467505 BAZ2BQ9UIF8 2168 aaKnown RBP16.67■□□□□ 0.26
RB1-202ENST00000467505 HAS3O00219 553 aa16.67■□□□□ 0.26
RB1-202ENST00000467505 SGSM2O43147 1006 aa16.67■□□□□ 0.26
RB1-202ENST00000467505 PPP1R11O60927 126 aaPredicted RBP16.67■□□□□ 0.26
RB1-202ENST00000467505 GGPS1O95749 300 aa16.67■□□□□ 0.26
RB1-202ENST00000467505 HOXD8P13378 290 aaPredicted RBP16.67■□□□□ 0.26
RB1-202ENST00000467505 KIF5BP33176 963 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms