RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.77□□□□□ -0.37
HPS1-208ENST00000467246 LZTFL1Q9NQ48 299 aa12.77□□□□□ -0.37
HPS1-208ENST00000467246 TTC26A0AVF1 554 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 BMP3P12645 472 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 UTP14CQ5TAP6 766 aaKnown RBP12.76□□□□□ -0.37
HPS1-208ENST00000467246 ZNF771Q7L3S4 317 aaPredicted RBP12.76□□□□□ -0.37
HPS1-208ENST00000467246 FBXO11Q86XK2 927 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 GLIS3Q8NEA6 775 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
HPS1-208ENST00000467246 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 PVALEFA0A1B0GWK0 134 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 USP11P51784 963 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 KIAA1755Q5JYT7 1200 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 CENPPQ6IPU0 288 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 CDAN1Q8IWY9 1227 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 LARGE2Q8N3Y3 721 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 ACRBPQ8NEB7 543 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 NOC3LQ8WTT2 800 aaKnown RBP12.76□□□□□ -0.37
HPS1-208ENST00000467246 KCNMB3Q9NPA1 279 aa12.76□□□□□ -0.37
HPS1-208ENST00000467246 CASQ1P31415 396 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 STAT3P40763 770 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 TRIM14Q14142 442 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 LRRC41Q15345 812 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 ERCC6LQ2NKX8 1250 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 TMTC1Q8IUR5 882 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 ACER1Q8TDN7 264 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 CRYGNQ8WXF5 182 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 GMLQ99445 158 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 CHP1Q99653 195 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 ZNF70Q9UC06 446 aaPredicted RBP12.75□□□□□ -0.37
HPS1-208ENST00000467246 CYP3A7-CYP3A51PA0A087WV96 503 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 A0A1W2PQC6 194 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 E9PMD0 336 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 OPLAHO14841 1288 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
HPS1-208ENST00000467246 KCNA3P22001 575 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 CYP3A7P24462 503 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 KLK7P49862 253 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 DNM2P50570 870 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 ARHGAP4P98171 946 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 DLGAP5Q15398 846 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 COBLL1Q53SF7 1204 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 PRR16Q569H4 304 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 TRERF1Q96PN7 1200 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 TMOD2Q9NZR1 351 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.75□□□□□ -0.37
HPS1-208ENST00000467246 KIAA1024Q9UPX6 916 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 COL4A5P29400 1685 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 RGPD3A6NKT7 1758 aaPredicted RBP12.75□□□□□ -0.37
HPS1-208ENST00000467246 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 ABL1P00519 1130 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 VIL1P09327 827 aaKnown RBP12.75□□□□□ -0.37
HPS1-208ENST00000467246 DPEP1P16444 411 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 HOXA13P31271 388 aaPredicted RBP12.75□□□□□ -0.37
HPS1-208ENST00000467246 PPP1R2P41236 205 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 TBC1D8BQ0IIM8 1120 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 MIIPQ5JXC2 388 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 KIFC2Q96AC6 838 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 DNAJC19Q96DA6 116 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 HERC5Q9UII4 1024 aaKnown RBP12.75□□□□□ -0.37
HPS1-208ENST00000467246 PRR12Q9ULL5 1215 aa12.75□□□□□ -0.37
HPS1-208ENST00000467246 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 POTECB2RU33 542 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
HPS1-208ENST00000467246 EHHADHQ08426 723 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 AP3B2Q13367 1082 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 CYP26C1Q6V0L0 522 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 RTKN2Q8IZC4 609 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 OGFOD1Q8N543 542 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 MBOAT7Q96N66 472 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 NAP1L4Q99733 375 aaKnown RBP12.74□□□□□ -0.37
HPS1-208ENST00000467246 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
HPS1-208ENST00000467246 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 FAM86B1E9PN63 330 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 FAM86B2P0C5J1 330 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 HYIQ5T013 277 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 BTNL9Q6UXG8 535 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 DEFB132Q7Z7B7 95 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 GUF1Q8N442 669 aaKnown RBP12.74□□□□□ -0.37
HPS1-208ENST00000467246 FAM151AQ8WW52 585 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 PSMD1Q99460 953 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 NOC4LQ9BVI4 516 aaKnown RBP12.74□□□□□ -0.37
HPS1-208ENST00000467246 CARD6Q9BX69 1037 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
HPS1-208ENST00000467246 LUC7L2Q9Y383 392 aaKnown RBP12.74□□□□□ -0.37
HPS1-208ENST00000467246 CNTNAP1P78357 1384 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 MIGA2Q7L4E1 593 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 FAM114A1Q8IWE2 563 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 OR8K1Q8NGG5 319 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 ETNPPLQ8TBG4 499 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 AGPAT5Q9NUQ2 364 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 CAPN11Q9UMQ6 739 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 COL2A1P02458 1487 aaPredicted RBP12.73□□□□□ -0.37
HPS1-208ENST00000467246 NPHP3-ACAD11A0A0J9YXS1 232 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
HPS1-208ENST00000467246 MED24O75448 989 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms