RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 HGSNATQ68CP4 663 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 CADPS2Q86UW7 1296 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 ISCUQ9H1K1 167 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 SEMA6BQ9H3T3 888 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 RIC8AQ9NPQ8 531 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 H0YHG0 523 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 HEXIM1O94992 359 aaKnown RBP17.19■□□□□ 0.34
CHD1L-205ENST00000467213 PLCG1P19174 1290 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 TNNC1P63316 161 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 UBE4AQ14139 1066 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 AGBL2Q5U5Z8 902 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 CALR3Q96L12 384 aaKnown RBP17.19■□□□□ 0.34
CHD1L-205ENST00000467213 LRRC27Q9C0I9 530 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 CEP72Q9P209 647 aa17.19■□□□□ 0.34
CHD1L-205ENST00000467213 SERPING1P05155 500 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 CARSP49589 748 aaKnown RBP17.18■□□□□ 0.34
CHD1L-205ENST00000467213 LACTB2Q53H82 288 aaPredicted RBP17.18■□□□□ 0.34
CHD1L-205ENST00000467213 RCSD1Q6JBY9 416 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 UNC13DQ70J99 1090 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 KIAA0895Q8NCT3 520 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 RASSF8Q8NHQ8 419 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 ZBTB9Q96C00 473 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 BARHL2Q9NY43 387 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 ASAP1Q9ULH1 1129 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 ZNF330Q9Y3S2 320 aaPredicted RBP17.18■□□□□ 0.34
CHD1L-205ENST00000467213 GOLGA6L7A0A1B0GV03 622 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 LRRC53A6NM62 1247 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 KRT14P02533 472 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 OR52Z1P0C646 297 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 NEDD9Q14511 834 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 RUFY4Q6ZNE9 571 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 KRT25Q7Z3Z0 450 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 LRRC45Q96CN5 670 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 TAF1DQ9H5J8 278 aaPredicted RBP17.18■□□□□ 0.34
CHD1L-205ENST00000467213 EPB41L5Q9HCM4 733 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 KLC4Q9NSK0 619 aa17.18■□□□□ 0.34
CHD1L-205ENST00000467213 SLC9C1Q4G0N8 1177 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 CCDC40Q4G0X9 1142 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 SALL4Q9UJQ4 1053 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 NFU1Q9UMS0 254 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 CCDC88AQ3V6T2 1871 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 ASIC1P78348 528 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 IFFO1Q0D2I5 559 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 ADAMTS3O15072 1205 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 ANXA13P27216 316 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 MARSP56192 900 aaKnown RBP17.17■□□□□ 0.34
CHD1L-205ENST00000467213 MTMR3Q13615 1198 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 SEPT2Q15019 361 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 DZIP3Q86Y13 1208 aaKnown RBP17.17■□□□□ 0.34
CHD1L-205ENST00000467213 CASKIN2Q8WXE0 1202 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 SLC12A6Q9UHW9 1150 aa17.17■□□□□ 0.34
CHD1L-205ENST00000467213 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 GOLGA6L10A6NI86 522 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 GHRP10912 638 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 SMARCA1P28370 1054 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 CHRNDQ07001 517 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 EHHADHQ08426 723 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 CCDC13Q8IYE1 715 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 ZKSCAN4Q969J2 545 aaPredicted RBP17.16■□□□□ 0.34
CHD1L-205ENST00000467213 PBKQ96KB5 322 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 ZMYND12Q9H0C1 365 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 MCM8Q9UJA3 840 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 STRCP1A6NGW2 1772 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 H0YGN5 161 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 GUCY2DQ02846 1103 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 LRRC55Q6ZSA7 311 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 RRAGAQ7L523 313 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 SH2D3CQ8N5H7 860 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 USP38Q8NB14 1042 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 CRNKL1Q9BZJ0 848 aaKnown RBP17.16■□□□□ 0.34
CHD1L-205ENST00000467213 NFS1Q9Y697 457 aa17.16■□□□□ 0.34
CHD1L-205ENST00000467213 GMNCA6NCL1 334 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 PP2D1A8MPX8 630 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 USP17L12C9JPN9 530 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 USP17L21D6R901 530 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 MYO1FO00160 1098 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 STXBP3O00186 592 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 EPHB6O15197 1021 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 TRAPPC3O43617 180 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 FAM153BP0C7A2 387 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 RDXP35241 583 aaKnown RBP17.15■□□□□ 0.34
CHD1L-205ENST00000467213 FAM153CQ494X1 144 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 ACTRT1Q8TDG2 376 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 CALML4Q96GE6 196 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 FAM153AQ9UHL3 310 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 PSEN1P49768 467 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 GUCY1A3Q02108 690 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 TXNRD1Q16881 649 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 SCFD2Q8WU76 684 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 CENPTQ96BT3 561 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 CYFIP2Q96F07 1278 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 DCP1AQ9NPI6 582 aaPredicted RBP17.15■□□□□ 0.34
CHD1L-205ENST00000467213 CEP83Q9Y592 693 aa17.15■□□□□ 0.34
CHD1L-205ENST00000467213 GNA14O95837 355 aa17.14■□□□□ 0.33
CHD1L-205ENST00000467213 MATR3P43243 847 aaKnown RBP eCLIP17.14■□□□□ 0.333e-7■■■■■ 27.4
CHD1L-205ENST00000467213 ATP1A2P50993 1020 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms