RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 TBX3O15119 743 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 MSH4O15457 936 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 ERCC3P19447 782 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 TXKP42681 527 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 SYKP43405 635 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 FSTL1Q12841 308 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 PRR16Q569H4 304 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 ZNF784Q8NCA9 323 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-202ENST00000467182 SHCBP1Q8NEM2 672 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 ZFP91Q96JP5 570 aaPredicted RBP14.71□□□□□ -0.05
COL4A1-202ENST00000467182 TIGD1Q96MW7 591 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 PDCD2LQ9BRP1 358 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 FAM13BQ9NYF5 915 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 UBIAD1Q9Y5Z9 338 aa14.71□□□□□ -0.05
COL4A1-202ENST00000467182 SYCE3A1L190 88 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 ITGB5P18084 799 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 EIF2AK2P19525 551 aaKnown RBP14.7□□□□□ -0.06
COL4A1-202ENST00000467182 COPB2P35606 906 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 TECP42680 631 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 SPIRE1Q08AE8 756 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 E2F4Q16254 413 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 LONRF3Q496Y0 759 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 CEP55Q53EZ4 464 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 NCAPG2Q86XI2 1143 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 AK8Q96MA6 479 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 RMDN3Q96TC7 470 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 MXRA8Q9BRK3 442 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 MMTAG2Q9BU76 263 aaKnown RBP14.7□□□□□ -0.06
COL4A1-202ENST00000467182 CCSER1Q9C0I3 900 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 ZCCHC17Q9NP64 241 aaKnown RBP14.7□□□□□ -0.06
COL4A1-202ENST00000467182 PLXNB2O15031 1838 aa14.7□□□□□ -0.06
COL4A1-202ENST00000467182 PFASO15067 1338 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 ZNFX1Q9P2E3 1918 aaKnown RBP14.69□□□□□ -0.06
COL4A1-202ENST00000467182 ACTN4O43707 911 aaKnown RBP14.69□□□□□ -0.06
COL4A1-202ENST00000467182 KINO60870 393 aaKnown RBP14.69□□□□□ -0.06
COL4A1-202ENST00000467182 ARP10275 920 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 BCRP11274 1271 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 CDC25AP30304 524 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 GCLCP48506 637 aaPredicted RBP14.69□□□□□ -0.06
COL4A1-202ENST00000467182 CNTN2Q02246 1040 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 PDIA5Q14554 519 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 CAMK4Q16566 473 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 KRBA2Q6ZNG9 492 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 NIPA1Q7RTP0 329 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 PLA2G4DQ86XP0 818 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 SLC5A5Q92911 643 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 CCDC102AQ96A19 550 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 FGD4Q96M96 766 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 FAM20AQ96MK3 541 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 PARK7Q99497 189 aaKnown RBP14.69□□□□□ -0.06
COL4A1-202ENST00000467182 FUCA2Q9BTY2 467 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 PORCNQ9H237 461 aa14.69□□□□□ -0.06
COL4A1-202ENST00000467182 TTC12Q9H892 705 aaPredicted RBP14.69□□□□□ -0.06
COL4A1-202ENST00000467182 ABT1Q9ULW3 272 aaKnown RBP14.69□□□□□ -0.06
COL4A1-202ENST00000467182 DNAJC25-GNG10A0A024R161 153 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 SOWAHBA6NEL2 793 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 POLR2DO15514 142 aaKnown RBP14.68□□□□□ -0.06
COL4A1-202ENST00000467182 YY1P25490 414 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 ZNF76P36508 570 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 ARHGEF16Q5VV41 709 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 XRRA1Q6P2D8 792 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 SH3RF1Q7Z6J0 888 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 VSIG10LQ86VR7 867 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 GAS2L3Q86XJ1 694 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 IFNL1Q8IU54 200 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 ELOA2Q8IYF1 753 aaPredicted RBP14.68□□□□□ -0.06
COL4A1-202ENST00000467182 SLFN12Q8IYM2 578 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 ANKRD35Q8N283 1001 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 ANKRD13CQ8N6S4 541 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 FAM133AQ8N9E0 248 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 GPRC5AQ8NFJ5 357 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 NSUN6Q8TEA1 469 aaKnown RBP14.68□□□□□ -0.06
COL4A1-202ENST00000467182 SMCR8Q8TEV9 937 aaPredicted RBP14.68□□□□□ -0.06
COL4A1-202ENST00000467182 LRRC15Q8TF66 581 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 UIMC1Q96RL1 719 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 ZIC5Q96T25 663 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 PANK2Q9BZ23 570 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 MROH8Q9H579 483 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 EFCC1Q9HA90 598 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 JADE2Q9NQC1 790 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 SERTAD1Q9UHV2 236 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 VAV3Q9UKW4 847 aa14.68□□□□□ -0.06
COL4A1-202ENST00000467182 POTEMA6NI47 508 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 PSMD10O75832 226 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 RGS20O76081 388 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 LETM1O95202 739 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-202ENST00000467182 NR3C2P08235 984 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 EDNRBP24530 442 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 TM4SF4P48230 202 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 MDM2Q00987 491 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-202ENST00000467182 SETQ01105 290 aaPredicted RBP14.67□□□□□ -0.06
COL4A1-202ENST00000467182 KARSQ15046 597 aaKnown RBP14.67□□□□□ -0.06
COL4A1-202ENST00000467182 TMEM266Q2M3C6 531 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 NAALADL2Q58DX5 795 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 LRSAM1Q6UWE0 723 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 B3GNT9Q6UX72 402 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 PDILTQ8N807 584 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 DNERQ8NFT8 737 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 NUDT12Q9BQG2 462 aa14.67□□□□□ -0.06
COL4A1-202ENST00000467182 WDR11Q9BZH6 1224 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms