RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 AMPD2Q01433 879 aa7.06□□□□□ -1.28
XRN1-206ENST00000467077 ABHD18Q0P651 414 aa7.06□□□□□ -1.28
XRN1-206ENST00000467077 KBTBD2Q8IY47 623 aa7.06□□□□□ -1.28
XRN1-206ENST00000467077 CBFA2T2O43439 604 aa7.05□□□□□ -1.28
XRN1-206ENST00000467077 VAMP4O75379 141 aa7.05□□□□□ -1.28
XRN1-206ENST00000467077 GUCY2CP25092 1073 aa7.05□□□□□ -1.28
XRN1-206ENST00000467077 PKN3Q6P5Z2 889 aa7.05□□□□□ -1.28
XRN1-206ENST00000467077 YTHDC1Q96MU7 727 aaKnown RBP7.05□□□□□ -1.28
XRN1-206ENST00000467077 CLIC6Q96NY7 704 aa7.05□□□□□ -1.28
XRN1-206ENST00000467077 HAUS7Q99871 368 aa7.05□□□□□ -1.28
XRN1-206ENST00000467077 FTSJ1Q9UET6 329 aa7.05□□□□□ -1.28
XRN1-206ENST00000467077 STAT5AP42229 794 aa7.04□□□□□ -1.28
XRN1-206ENST00000467077 ZYXQ15942 572 aaKnown RBP7.04□□□□□ -1.28
XRN1-206ENST00000467077 FBXW10Q5XX13 1052 aa7.04□□□□□ -1.28
XRN1-206ENST00000467077 UNC5AQ6ZN44 842 aa7.04□□□□□ -1.28
XRN1-206ENST00000467077 ADAT2Q7Z6V5 191 aaKnown RBP7.04□□□□□ -1.28
XRN1-206ENST00000467077 KIAA0825Q8IV33 1275 aa7.04□□□□□ -1.28
XRN1-206ENST00000467077 MBD6Q96DN6 1003 aa7.04□□□□□ -1.28
XRN1-206ENST00000467077 ZSWIM3Q96MP5 696 aa7.04□□□□□ -1.28
XRN1-206ENST00000467077 WRNIP1Q96S55 665 aa7.04□□□□□ -1.28
XRN1-206ENST00000467077 ZNF214Q9UL59 606 aaPredicted RBP7.04□□□□□ -1.28
XRN1-206ENST00000467077 SGSM2O43147 1006 aa7.03□□□□□ -1.28
XRN1-206ENST00000467077 PPM1BO75688 479 aa7.03□□□□□ -1.28
XRN1-206ENST00000467077 ADAM9Q13443 819 aa7.03□□□□□ -1.28
XRN1-206ENST00000467077 HEATR6Q6AI08 1181 aaKnown RBP7.03□□□□□ -1.28
XRN1-206ENST00000467077 SND1Q7KZF4 910 aaKnown RBP eCLIP7.03□□□□□ -1.28
XRN1-206ENST00000467077 MILR1Q7Z6M3 343 aa7.03□□□□□ -1.28
XRN1-206ENST00000467077 CHFRQ96EP1 664 aa7.03□□□□□ -1.28
XRN1-206ENST00000467077 WWC2-AS2Q96NR7 200 aa7.03□□□□□ -1.28
XRN1-206ENST00000467077 BARX1Q9HBU1 254 aaPredicted RBP7.03□□□□□ -1.28
XRN1-206ENST00000467077 BTG4Q9NY30 223 aa7.03□□□□□ -1.28
XRN1-206ENST00000467077 B4GALT4O60513 344 aa7.02□□□□□ -1.29
XRN1-206ENST00000467077 ZNF202O95125 648 aa7.02□□□□□ -1.29
XRN1-206ENST00000467077 IL13P35225 146 aa7.02□□□□□ -1.29
XRN1-206ENST00000467077 SLC6A11P48066 632 aa7.02□□□□□ -1.29
XRN1-206ENST00000467077 PRKD1Q15139 912 aaPredicted RBP7.02□□□□□ -1.29
XRN1-206ENST00000467077 KLHL36Q8N4N3 616 aa7.02□□□□□ -1.29
XRN1-206ENST00000467077 PLEKHO2Q8TD55 490 aa7.02□□□□□ -1.29
XRN1-206ENST00000467077 SPON2Q9BUD6 331 aa7.02□□□□□ -1.29
XRN1-206ENST00000467077 CGGBP1Q9UFW8 167 aaPredicted RBP7.02□□□□□ -1.29
XRN1-206ENST00000467077 THBDP07204 575 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 GRB10Q13322 594 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 FOXE3Q13461 319 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 ZNF575Q86XF7 245 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 TEX2Q8IWB9 1127 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 Q8TCH9 128 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 CSRNP2Q9H175 543 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 CROTQ9UKG9 612 aa7.01□□□□□ -1.29
XRN1-206ENST00000467077 NRN1LQ496H8 165 aa7□□□□□ -1.29
XRN1-206ENST00000467077 MIIPQ5JXC2 388 aa7□□□□□ -1.29
XRN1-206ENST00000467077 PTPN18Q99952 460 aa7□□□□□ -1.29
XRN1-206ENST00000467077 MEGF9Q9H1U4 602 aa7□□□□□ -1.29
XRN1-206ENST00000467077 WDR26Q9H7D7 661 aa7□□□□□ -1.29
XRN1-206ENST00000467077 CLEC1BQ9P126 229 aa7□□□□□ -1.29
XRN1-206ENST00000467077 SUGT1Q9Y2Z0 365 aa7□□□□□ -1.29
XRN1-206ENST00000467077 ZDHHC9Q9Y397 364 aa7□□□□□ -1.29
XRN1-206ENST00000467077 C22orf46C9J442 243 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 SUPT5HO00267 1087 aaKnown RBP6.99□□□□□ -1.29
XRN1-206ENST00000467077 PPFIA2O75334 1257 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 CR1LQ2VPA4 569 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 GNPTABQ3T906 1256 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 RNF207Q6ZRF8 634 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 CEP89Q96ST8 783 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 KLHL25Q9H0H3 589 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 SLC12A7Q9Y666 1083 aa6.99□□□□□ -1.29
XRN1-206ENST00000467077 MCM7P33993 719 aa6.98□□□□□ -1.29
XRN1-206ENST00000467077 NFATC3Q12968 1075 aa6.98□□□□□ -1.29
XRN1-206ENST00000467077 MROH9Q5TGP6 573 aa6.98□□□□□ -1.29
XRN1-206ENST00000467077 DNAJC14Q6Y2X3 702 aaPredicted RBP6.98□□□□□ -1.29
XRN1-206ENST00000467077 FGD4Q96M96 766 aa6.98□□□□□ -1.29
XRN1-206ENST00000467077 MLLT6P55198 1093 aaPredicted RBP6.97□□□□□ -1.29
XRN1-206ENST00000467077 TAGLNQ01995 201 aaKnown RBP6.97□□□□□ -1.29
XRN1-206ENST00000467077 TRMT10BQ6PF06 316 aaKnown RBP6.97□□□□□ -1.29
XRN1-206ENST00000467077 RUFY4Q6ZNE9 571 aa6.97□□□□□ -1.29
XRN1-206ENST00000467077 RALYLQ86SE5 291 aaKnown RBP6.97□□□□□ -1.29
XRN1-206ENST00000467077 ZCCHC14Q8WYQ9 949 aaKnown RBP6.97□□□□□ -1.29
XRN1-206ENST00000467077 TMEM209Q96SK2 561 aa6.97□□□□□ -1.29
XRN1-206ENST00000467077 ADOQ96SZ5 270 aa6.97□□□□□ -1.29
XRN1-206ENST00000467077 MMP19Q99542 508 aa6.97□□□□□ -1.29
XRN1-206ENST00000467077 PLS3P13797 630 aa6.96□□□□□ -1.3
XRN1-206ENST00000467077 ERICH6Q7L0X2 663 aa6.96□□□□□ -1.3
XRN1-206ENST00000467077 AMER2Q8N7J2 671 aa6.96□□□□□ -1.3
XRN1-206ENST00000467077 RBBP8NLQ8NC74 664 aaPredicted RBP6.96□□□□□ -1.3
XRN1-206ENST00000467077 TOE1Q96GM8 510 aaKnown RBP6.96□□□□□ -1.3
XRN1-206ENST00000467077 TRIM8Q9BZR9 551 aa6.96□□□□□ -1.3
XRN1-206ENST00000467077 BCL11AQ9H165 835 aa6.96□□□□□ -1.3
XRN1-206ENST00000467077 PHAXQ9H814 394 aaKnown RBP6.96□□□□□ -1.3
XRN1-206ENST00000467077 EPHX1P07099 455 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 NANOS3P60323 173 aaKnown RBP6.95□□□□□ -1.3
XRN1-206ENST00000467077 PTH1RQ03431 593 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 DPTQ07507 201 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 CHRNA2Q15822 529 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 MBLAC2Q68D91 279 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 RIOX2Q8IUF8 465 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 ARHGEF39Q8N4T4 335 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 GIMAP8Q8ND71 665 aaPredicted RBP6.95□□□□□ -1.3
XRN1-206ENST00000467077 DPF3Q92784 378 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 ZNF503Q96F45 646 aa6.95□□□□□ -1.3
XRN1-206ENST00000467077 RCC1LQ96I51 464 aaKnown RBP6.95□□□□□ -1.3
XRN1-206ENST00000467077 DTLQ9NZJ0 730 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms