RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 SYDE2Q5VT97 1194 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 RASEFQ8IZ41 740 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 DNERQ8NFT8 737 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 MAP4K1Q92918 833 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 SUGCTQ9HAC7 445 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 CTNNA3Q9UI47 895 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 MTUS1Q9ULD2 1270 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 SNX14Q9Y5W7 946 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 BDP1A6H8Y1 2624 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 MYH8P13535 1937 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.01□□□□□ -0.81
DDR1-242ENST00000465966 LCHNA4D1U4 455 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 RANBP6O60518 1105 aaKnown RBP10.01□□□□□ -0.81
DDR1-242ENST00000465966 NMT2O60551 498 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 GJB5O95377 273 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 CASTP20810 708 aaKnown RBP10.01□□□□□ -0.81
DDR1-242ENST00000465966 KCNA5P22460 613 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 SLC16A2P36021 539 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 ERVK-21P61565 698 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 IKBKEQ14164 716 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 NECTIN1Q15223 517 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 PTPROQ16827 1216 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 BTNL9Q6UXG8 535 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 SLC30A10Q6XR72 485 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 LRRC8DQ7L1W4 858 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 SESTD1Q86VW0 696 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 FAM178BQ8IXR5 827 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 PPP1R13LQ8WUF5 828 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 KCNB2Q92953 911 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 CD320Q9NPF0 282 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 IL17RBQ9NRM6 502 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 FAM50BQ9Y247 325 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 TAF6LQ9Y6J9 622 aa10.01□□□□□ -0.81
DDR1-242ENST00000465966 BAZ2AQ9UIF9 1905 aaKnown RBP10.01□□□□□ -0.81
DDR1-242ENST00000465966 GREB1LQ9C091 1923 aaPredicted RBP10□□□□□ -0.81
DDR1-242ENST00000465966 LINC01553A4QN01 128 aa10□□□□□ -0.81
DDR1-242ENST00000465966 SLC27A2O14975 620 aa10□□□□□ -0.81
DDR1-242ENST00000465966 GH1P01241 217 aa10□□□□□ -0.81
DDR1-242ENST00000465966 TOP1P11387 765 aaKnown RBP10□□□□□ -0.81
DDR1-242ENST00000465966 EDNRBP24530 442 aa10□□□□□ -0.81
DDR1-242ENST00000465966 RPS6P62753 249 aaKnown RBP10□□□□□ -0.81
DDR1-242ENST00000465966 DEFB103AP81534 67 aa10□□□□□ -0.81
DDR1-242ENST00000465966 CTDSPL2Q05D32 466 aa10□□□□□ -0.81
DDR1-242ENST00000465966 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
DDR1-242ENST00000465966 TTBK2Q6IQ55 1244 aa10□□□□□ -0.81
DDR1-242ENST00000465966 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
DDR1-242ENST00000465966 SPRED2Q7Z698 418 aa10□□□□□ -0.81
DDR1-242ENST00000465966 TMCO2Q7Z6W1 182 aaPredicted RBP10□□□□□ -0.81
DDR1-242ENST00000465966 C7orf31Q8N865 590 aa10□□□□□ -0.81
DDR1-242ENST00000465966 GADD45GIP1Q8TAE8 222 aaPredicted RBP10□□□□□ -0.81
DDR1-242ENST00000465966 COPS5Q92905 334 aa10□□□□□ -0.81
DDR1-242ENST00000465966 DSCC1Q9BVC3 393 aa10□□□□□ -0.81
DDR1-242ENST00000465966 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
DDR1-242ENST00000465966 KCNH6Q9H252 994 aa10□□□□□ -0.81
DDR1-242ENST00000465966 GPCPD1Q9NPB8 672 aa10□□□□□ -0.81
DDR1-242ENST00000465966 TOMM22Q9NS69 142 aa10□□□□□ -0.81
DDR1-242ENST00000465966 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10□□□□□ -0.81
DDR1-242ENST00000465966 INSL6Q9Y581 213 aa10□□□□□ -0.81
DDR1-242ENST00000465966 FRMPD2Q68DX3 1309 aaPredicted RBP10□□□□□ -0.81
DDR1-242ENST00000465966 CXCL10P02778 98 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 MMP3P08254 477 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 HSPD1P10809 573 aaKnown RBP9.99□□□□□ -0.81
DDR1-242ENST00000465966 CKBP12277 381 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 MRE11P49959 708 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 RBL2Q08999 1139 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 BECN1Q14457 450 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 DGKDQ16760 1214 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 GDF6Q6KF10 455 aaPredicted RBP9.99□□□□□ -0.81
DDR1-242ENST00000465966 FAM117BQ6P1L5 589 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 FBXO22Q8NEZ5 403 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 AFG1LQ8WV93 481 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 CLEC4DQ8WXI8 215 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 SNX21Q969T3 373 aa9.99□□□□□ -0.81
DDR1-242ENST00000465966 U3KPZ7 1027 aaPredicted RBP9.99□□□□□ -0.81
DDR1-242ENST00000465966 XIRP2A4UGR9 3374 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 GRXCR2A6NFK2 248 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 DCXO43602 365 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 ORC4O43929 436 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 NBNO60934 754 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 AMHP03971 560 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 IL9P15248 144 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 NOVP48745 357 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 PTK7Q13308 1070 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 COL9A3Q14050 684 aaPredicted RBP9.98□□□□□ -0.81
DDR1-242ENST00000465966 GPNMBQ14956 572 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 LY6KQ17RY6 165 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 ADCK5Q3MIX3 580 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 TIGD5Q53EQ6 642 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 SEPT14Q6ZU15 432 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 RASGRP2Q7LDG7 609 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 CHST3Q7LGC8 479 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 HSCBQ8IWL3 235 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 RGS22Q8NE09 1264 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 MRPL38Q96DV4 380 aaKnown RBP9.98□□□□□ -0.81
DDR1-242ENST00000465966 SAMD11Q96NU1 681 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 TMEM47Q9BQJ4 181 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 UPF3BQ9BZI7 483 aaKnown RBP9.98□□□□□ -0.81
DDR1-242ENST00000465966 MAF1Q9H063 256 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 INCENPQ9NQS7 918 aa9.98□□□□□ -0.81
DDR1-242ENST00000465966 GTF2IRD1Q9UHL9 959 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms