RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
CACNA1C-224ENST00000465934 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
CACNA1C-224ENST00000465934 PGM5Q15124 567 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 SRBD1Q8N5C6 995 aaKnown RBP16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 VWCEQ96DN2 955 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 SCLYQ96I15 445 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 TMEM87BQ96K49 555 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 MAP3K14Q99558 947 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 SPZ1Q9BXG8 430 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
CACNA1C-224ENST00000465934 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 CCDC69A6NI79 296 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 RBAK-RBAKDNI3L0D1 243 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 KPNA6O60684 536 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 KIF5BP33176 963 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 RASIP1Q5U651 963 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 KAT2BQ92831 832 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 MTA3Q9BTC8 594 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 SEMA6BQ9H3T3 888 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 IL23AQ9NPF7 189 aa16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 MAP3K20Q9NYL2 800 aaKnown RBP16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 CXXC1Q9P0U4 656 aaPredicted RBP16.26■□□□□ 0.19
CACNA1C-224ENST00000465934 CDC45O75419 566 aa16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 LIFRP42702 1097 aa16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 SP2Q02086 613 aa16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 NFRKBQ6P4R8 1299 aa16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 PSRC1Q6PGN9 363 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 CDX2Q99626 313 aaPredicted RBP16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
CACNA1C-224ENST00000465934 CHD9Q3L8U1 2897 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 ZNF286BP0CG31 522 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 DNAJB2P25686 324 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 CCND2P30279 289 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 PBX2P40425 430 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 TRAF1Q13077 416 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 ADCK5Q3MIX3 580 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 USP17L6PQ6QN14 398 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 OTOP2Q7RTS6 562 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 TMTC2Q8N394 836 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 SAMD3Q8N6K7 520 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 BCAS3Q9H6U6 928 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 SLC12A7Q9Y666 1083 aa16.24■□□□□ 0.19
CACNA1C-224ENST00000465934 FRMPD4Q14CM0 1322 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 BAZ2BQ9UIF8 2168 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 UBA1P22314 1058 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 MRPS9P82933 396 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 GDF6Q6KF10 455 aaPredicted RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 TMTC3Q6ZXV5 915 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 DHX37Q8IY37 1157 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 PPTC7Q8NI37 304 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 HERVK_113Q902F9 699 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 NEK1Q96PY6 1258 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 LZTS2Q9BRK4 669 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 PRUNE2Q8WUY3 3088 aa16.23■□□□□ 0.19
CACNA1C-224ENST00000465934 SCN10AQ9Y5Y9 1956 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 MEIS2O14770 477 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 GGPS1O95749 300 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 FGBP02675 491 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 SMARCA1P28370 1054 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 GNAQP50148 359 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 EXOSC10Q01780 885 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 LAMC2Q13753 1193 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 DGKDQ16760 1214 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 CELF3Q5SZQ8 465 aaKnown RBP16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 DEFB128Q7Z7B8 93 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 FANCBQ8NB91 859 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 SLC17A8Q8NDX2 589 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 MYLIPQ8WY64 445 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 SPATA33Q96N06 139 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 PBX4Q9BYU1 374 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 RTEL1Q9NZ71 1219 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
CACNA1C-224ENST00000465934 MYH6P13533 1939 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 F2P00734 622 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 CALM1P0DP23 149 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 CALM2P0DP24 149 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 CALM3P0DP25 149 aa16.21■□□□□ 0.19
CACNA1C-224ENST00000465934 CPA1P15085 419 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms