RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 TXNP10599 105 aaKnown RBP29.79■■■□□ 2.36
SMC4-206ENST00000465903 SCG2P13521 617 aa29.79■■■□□ 2.36
SMC4-206ENST00000465903 MRPS9P82933 396 aaKnown RBP29.79■■■□□ 2.36
SMC4-206ENST00000465903 TTLL4Q14679 1199 aa29.79■■■□□ 2.36
SMC4-206ENST00000465903 PRPF38BQ5VTL8 546 aaKnown RBP29.79■■■□□ 2.36
SMC4-206ENST00000465903 KIF2CQ99661 725 aa29.79■■■□□ 2.36
SMC4-206ENST00000465903 RNF26Q9BY78 433 aaPredicted RBP29.79■■■□□ 2.36
SMC4-206ENST00000465903 H0YGN5 161 aa29.78■■■□□ 2.36
SMC4-206ENST00000465903 NKRFO15226 690 aaKnown RBP eCLIP29.78■■■□□ 2.36
SMC4-206ENST00000465903 CCND2P30279 289 aa29.78■■■□□ 2.36
SMC4-206ENST00000465903 NEK4P51957 841 aa29.78■■■□□ 2.36
SMC4-206ENST00000465903 SNX17Q15036 470 aa29.78■■■□□ 2.36
SMC4-206ENST00000465903 FSCN1Q16658 493 aaKnown RBP29.78■■■□□ 2.36
SMC4-206ENST00000465903 SLC26A6Q9BXS9 759 aa29.78■■■□□ 2.36
SMC4-206ENST00000465903 RIC8AQ9NPQ8 531 aa29.78■■■□□ 2.36
SMC4-206ENST00000465903 RBM27Q9P2N5 1060 aaKnown RBP29.78■■■□□ 2.36
SMC4-206ENST00000465903 SMCO2A6NFE2 343 aa29.77■■■□□ 2.36
SMC4-206ENST00000465903 SCRN1Q12765 414 aa29.77■■■□□ 2.36
SMC4-206ENST00000465903 LY6KQ17RY6 165 aa29.77■■■□□ 2.36
SMC4-206ENST00000465903 C7orf61Q8IZ16 206 aa29.77■■■□□ 2.36
SMC4-206ENST00000465903 DDX41Q9UJV9 622 aaKnown RBP29.77■■■□□ 2.36
SMC4-206ENST00000465903 PFKFB2O60825 505 aa29.76■■■□□ 2.35
SMC4-206ENST00000465903 RTP1P59025 263 aa29.76■■■□□ 2.35
SMC4-206ENST00000465903 ANKRD1Q15327 319 aa29.76■■■□□ 2.35
SMC4-206ENST00000465903 OR6J1Q8NGC5 347 aa29.76■■■□□ 2.35
SMC4-206ENST00000465903 NR2E3Q9Y5X4 410 aa29.76■■■□□ 2.35
SMC4-206ENST00000465903 DOCK5Q9H7D0 1870 aa29.76■■■□□ 2.35
SMC4-206ENST00000465903 C1orf53Q5VUE5 145 aa29.75■■■□□ 2.35
SMC4-206ENST00000465903 C22orf23Q9BZE7 217 aa29.75■■■□□ 2.35
SMC4-206ENST00000465903 PCDHA6Q9UN73 950 aa29.75■■■□□ 2.35
SMC4-206ENST00000465903 PCDHA8Q9Y5H6 950 aa29.75■■■□□ 2.35
SMC4-206ENST00000465903 ADAMTS3O15072 1205 aa29.74■■■□□ 2.35
SMC4-206ENST00000465903 ADCY7P51828 1080 aa29.74■■■□□ 2.35
SMC4-206ENST00000465903 AKAP17AQ02040 695 aaKnown RBP29.74■■■□□ 2.35
SMC4-206ENST00000465903 SLKQ9H2G2 1235 aaPredicted RBP29.74■■■□□ 2.35
SMC4-206ENST00000465903 STARD7Q9NQZ5 370 aa29.74■■■□□ 2.35
SMC4-206ENST00000465903 CPLX1O14810 134 aa29.73■■■□□ 2.35
SMC4-206ENST00000465903 LARGE1O95461 756 aa29.73■■■□□ 2.35
SMC4-206ENST00000465903 RBM25P49756 843 aaKnown RBP29.73■■■□□ 2.35
SMC4-206ENST00000465903 CLK2P49760 499 aaKnown RBP29.73■■■□□ 2.35
SMC4-206ENST00000465903 SSRP1Q08945 709 aaKnown RBP29.73■■■□□ 2.35
SMC4-206ENST00000465903 PCNX4Q63HM2 1172 aa29.73■■■□□ 2.35
SMC4-206ENST00000465903 TEX2Q8IWB9 1127 aa29.73■■■□□ 2.35
SMC4-206ENST00000465903 ZMYND12Q9H0C1 365 aa29.73■■■□□ 2.35
SMC4-206ENST00000465903 RTEL1Q9NZ71 1219 aa29.73■■■□□ 2.35
SMC4-206ENST00000465903 MRVI1Q9Y6F6 885 aa29.73■■■□□ 2.35
SMC4-206ENST00000465903 ELP1O95163 1332 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 ESYT2A0FGR8 921 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 A6NJR5 290 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 ARHGAP1Q07960 439 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 ME3Q16798 604 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 TRIM60Q495X7 471 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 CXCL17Q6UXB2 119 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 GLT1D1Q96MS3 346 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 INPP4AQ96PE3 977 aaPredicted RBP29.72■■■□□ 2.35
SMC4-206ENST00000465903 TMEM260Q9NX78 707 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 ATP11BQ9Y2G3 1177 aa29.72■■■□□ 2.35
SMC4-206ENST00000465903 SPDYE3A6NKU9 549 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 ZEB2O60315 1214 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 STAM2O75886 525 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 GH1P01241 217 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 SP2Q02086 613 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 XRRA1Q6P2D8 792 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 KCNV1Q6PIU1 500 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 PGBD1Q96JS3 809 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 ZMYND8Q9ULU4 1186 aaPredicted RBP29.71■■■□□ 2.35
SMC4-206ENST00000465903 SCN10AQ9Y5Y9 1956 aa29.71■■■□□ 2.35
SMC4-206ENST00000465903 ICAM3P32942 547 aa29.7■■■□□ 2.35
SMC4-206ENST00000465903 CPT1AP50416 773 aa29.7■■■□□ 2.35
SMC4-206ENST00000465903 CDK7P50613 346 aa29.7■■■□□ 2.35
SMC4-206ENST00000465903 SEMA3FQ13275 785 aa29.7■■■□□ 2.35
SMC4-206ENST00000465903 TRIM22Q8IYM9 498 aa29.7■■■□□ 2.35
SMC4-206ENST00000465903 GLT8D2Q9H1C3 349 aa29.7■■■□□ 2.35
SMC4-206ENST00000465903 DTNBO60941 627 aa29.69■■■□□ 2.34
SMC4-206ENST00000465903 CTDNEP1O95476 244 aa29.69■■■□□ 2.34
SMC4-206ENST00000465903 FOSP01100 380 aaPredicted RBP29.69■■■□□ 2.34
SMC4-206ENST00000465903 TLE2Q04725 743 aa29.69■■■□□ 2.34
SMC4-206ENST00000465903 CPLX2Q6PUV4 134 aaKnown RBP29.69■■■□□ 2.34
SMC4-206ENST00000465903 NECAB1Q8N987 351 aa29.69■■■□□ 2.34
SMC4-206ENST00000465903 CCDC12Q8WUD4 166 aaPredicted RBP29.69■■■□□ 2.34
SMC4-206ENST00000465903 VTI1AQ96AJ9 217 aa29.69■■■□□ 2.34
SMC4-206ENST00000465903 VPS54Q9P1Q0 977 aa29.69■■■□□ 2.34
SMC4-206ENST00000465903 PCDH10Q9P2E7 1040 aa29.69■■■□□ 2.34
SMC4-206ENST00000465903 SPATA31C2B4DYI2 1134 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 CABYRO75952 493 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 DEXIO95424 95 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 TGFB3P10600 412 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 AFG1LQ8WV93 481 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 EMID1Q96A84 441 aaPredicted RBP29.68■■■□□ 2.34
SMC4-206ENST00000465903 ANO3Q9BYT9 981 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 C6orf50Q9HD87 102 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 GRIN2DO15399 1336 aa29.68■■■□□ 2.34
SMC4-206ENST00000465903 MYL3P08590 195 aa29.67■■■□□ 2.34
SMC4-206ENST00000465903 SYN1P17600 705 aa29.67■■■□□ 2.34
SMC4-206ENST00000465903 UBA1P22314 1058 aaKnown RBP29.67■■■□□ 2.34
SMC4-206ENST00000465903 PURAQ00577 322 aaKnown RBP29.67■■■□□ 2.34
SMC4-206ENST00000465903 AP3B2Q13367 1082 aa29.67■■■□□ 2.34
SMC4-206ENST00000465903 GNPTABQ3T906 1256 aa29.67■■■□□ 2.34
SMC4-206ENST00000465903 MYSM1Q5VVJ2 828 aa29.67■■■□□ 2.34
SMC4-206ENST00000465903 AIFM3Q96NN9 605 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms