RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 SGSM2O43147 1006 aa8.82□□□□□ -1
SSB-207ENST00000465871 CYP2C8P10632 490 aa8.82□□□□□ -1
SSB-207ENST00000465871 DNAJA1P31689 397 aaKnown RBP8.82□□□□□ -1
SSB-207ENST00000465871 SF1Q15637 639 aaKnown RBP8.82□□□□□ -1
SSB-207ENST00000465871 PRSS53Q2L4Q9 553 aa8.82□□□□□ -1
SSB-207ENST00000465871 SLC10A6Q3KNW5 377 aa8.82□□□□□ -1
SSB-207ENST00000465871 ETV3LQ6ZN32 361 aa8.82□□□□□ -1
SSB-207ENST00000465871 NLRP10Q86W26 655 aa8.82□□□□□ -1
SSB-207ENST00000465871 MIB1Q86YT6 1006 aa8.82□□□□□ -1
SSB-207ENST00000465871 PPIL6Q8IXY8 311 aa8.82□□□□□ -1
SSB-207ENST00000465871 NOX5Q96PH1 765 aa8.82□□□□□ -1
SSB-207ENST00000465871 ADAM7Q9H2U9 754 aa8.82□□□□□ -1
SSB-207ENST00000465871 X6R8D5 127 aa8.82□□□□□ -1
SSB-207ENST00000465871 C8BP07358 591 aa8.81□□□□□ -1
SSB-207ENST00000465871 KCNJ6P48051 423 aa8.81□□□□□ -1
SSB-207ENST00000465871 SLC43A3Q8NBI5 491 aa8.81□□□□□ -1
SSB-207ENST00000465871 HNRNPLLQ8WVV9 542 aaKnown RBP8.81□□□□□ -1
SSB-207ENST00000465871 SPATA25Q9BR10 227 aa8.81□□□□□ -1
SSB-207ENST00000465871 R3HCC1Q9Y3T6 440 aaKnown RBP8.81□□□□□ -1
SSB-207ENST00000465871 AGRPO00253 132 aa8.8□□□□□ -1
SSB-207ENST00000465871 LTBRP36941 435 aa8.8□□□□□ -1
SSB-207ENST00000465871 BCL6P41182 706 aa8.8□□□□□ -1
SSB-207ENST00000465871 ERICH6BQ5W0A0 696 aa8.8□□□□□ -1
SSB-207ENST00000465871 CEP68Q76N32 757 aa8.8□□□□□ -1
SSB-207ENST00000465871 CARFQ8N187 725 aa8.8□□□□□ -1
SSB-207ENST00000465871 TMEM145Q8NBT3 493 aa8.8□□□□□ -1
SSB-207ENST00000465871 RCBTB1Q8NDN9 531 aa8.8□□□□□ -1
SSB-207ENST00000465871 DDX11Q96FC9 970 aa8.8□□□□□ -1
SSB-207ENST00000465871 TRMT2BQ96GJ1 504 aaKnown RBP8.8□□□□□ -1
SSB-207ENST00000465871 C1orf159Q96HA4 380 aa8.8□□□□□ -1
SSB-207ENST00000465871 GMLQ99445 158 aa8.8□□□□□ -1
SSB-207ENST00000465871 CAPNS1P04632 268 aa8.79□□□□□ -1
SSB-207ENST00000465871 LINC00482Q8N8I6 264 aa8.79□□□□□ -1
SSB-207ENST00000465871 ZBTB8AQ96BR9 441 aa8.79□□□□□ -1
SSB-207ENST00000465871 TMEM169Q96HH4 297 aa8.79□□□□□ -1
SSB-207ENST00000465871 PCDH18Q9HCL0 1135 aa8.79□□□□□ -1
SSB-207ENST00000465871 NTMQ9P121 344 aa8.79□□□□□ -1
SSB-207ENST00000465871 FBXL7Q9UJT9 491 aa8.79□□□□□ -1
SSB-207ENST00000465871 PALD1Q9ULE6 856 aa8.79□□□□□ -1
SSB-207ENST00000465871 RBM25P49756 843 aaKnown RBP8.78□□□□□ -1
SSB-207ENST00000465871 DDR2Q16832 855 aa8.78□□□□□ -1
SSB-207ENST00000465871 SLC35F1Q5T1Q4 408 aa8.78□□□□□ -1
SSB-207ENST00000465871 NT5DC1Q5TFE4 455 aa8.78□□□□□ -1
SSB-207ENST00000465871 DENND5AQ6IQ26 1287 aa8.78□□□□□ -1
SSB-207ENST00000465871 CELF2-AS1Q8N7Q2 184 aa8.78□□□□□ -1
SSB-207ENST00000465871 GORASP1Q9BQQ3 440 aa8.78□□□□□ -1
SSB-207ENST00000465871 USP40Q9NVE5 1235 aa8.78□□□□□ -1
SSB-207ENST00000465871 SPATA6Q9NWH7 488 aaPredicted RBP8.78□□□□□ -1
SSB-207ENST00000465871 COA3Q9Y2R0 106 aaPredicted RBP8.78□□□□□ -1
SSB-207ENST00000465871 PPP2R2AP63151 447 aa8.77□□□□□ -1.01
SSB-207ENST00000465871 ANKS3Q6ZW76 656 aa8.77□□□□□ -1.01
SSB-207ENST00000465871 MILR1Q7Z6M3 343 aa8.77□□□□□ -1.01
SSB-207ENST00000465871 ZC3H18Q86VM9 953 aaKnown RBP8.77□□□□□ -1.01
SSB-207ENST00000465871 FAM126BQ8IXS8 530 aa8.77□□□□□ -1.01
SSB-207ENST00000465871 ZNF652Q9Y2D9 606 aa8.77□□□□□ -1.01
SSB-207ENST00000465871 H7BY64 318 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 SMARCA5O60264 1052 aaPredicted RBP8.76□□□□□ -1.01
SSB-207ENST00000465871 CELA3BP08861 270 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 LCP1P13796 627 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 GRIA2P42262 883 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 MAP4K2Q12851 820 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 LSAMPQ13449 338 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 SMAD4Q13485 552 aaKnown RBP8.76□□□□□ -1.01
SSB-207ENST00000465871 SKOR2Q2VWA4 1001 aaPredicted RBP8.76□□□□□ -1.01
SSB-207ENST00000465871 C11orf84Q9BUA3 381 aaPredicted RBP8.76□□□□□ -1.01
SSB-207ENST00000465871 ST7Q9NRC1 585 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 PCDHA2Q9Y5H9 948 aa8.76□□□□□ -1.01
SSB-207ENST00000465871 SARSP49591 514 aaKnown RBP8.75□□□□□ -1.01
SSB-207ENST00000465871 CHRNA2Q15822 529 aa8.75□□□□□ -1.01
SSB-207ENST00000465871 ZFYVE27Q5T4F4 411 aa8.75□□□□□ -1.01
SSB-207ENST00000465871 TTLL7Q6ZT98 887 aa8.75□□□□□ -1.01
SSB-207ENST00000465871 FAM26EQ8N5C1 309 aa8.75□□□□□ -1.01
SSB-207ENST00000465871 KCTD13Q8WZ19 329 aa8.75□□□□□ -1.01
SSB-207ENST00000465871 IGSF5Q9NSI5 407 aa8.75□□□□□ -1.01
SSB-207ENST00000465871 NPFFR2Q9Y5X5 522 aa8.75□□□□□ -1.01
SSB-207ENST00000465871 A0A1W2PQU0 124 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 KLF4O43474 513 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 THBS2P35442 1172 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 GJA9P57773 515 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 CD300LDQ6UXZ3 194 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 KYQ8NBH2 561 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 CHAMP1Q96JM3 812 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 IER2Q9BTL4 223 aa8.74□□□□□ -1.01
SSB-207ENST00000465871 NGRNQ9NPE2 291 aaKnown RBP8.74□□□□□ -1.01
SSB-207ENST00000465871 PRICKLE3O43900 615 aaPredicted RBP8.73□□□□□ -1.01
SSB-207ENST00000465871 NOBOXO60393 691 aa8.73□□□□□ -1.01
SSB-207ENST00000465871 RTP5Q14D33 572 aa8.73□□□□□ -1.01
SSB-207ENST00000465871 ZNF761Q86XN6 746 aaPredicted RBP8.73□□□□□ -1.01
SSB-207ENST00000465871 SGSM3Q96HU1 749 aa8.73□□□□□ -1.01
SSB-207ENST00000465871 SYT3Q9BQG1 590 aa8.73□□□□□ -1.01
SSB-207ENST00000465871 YIPF4Q9BSR8 244 aa8.73□□□□□ -1.01
SSB-207ENST00000465871 KRTAP9-3Q9BYQ3 159 aa8.73□□□□□ -1.01
SSB-207ENST00000465871 CLDND1Q9NY35 253 aa8.73□□□□□ -1.01
SSB-207ENST00000465871 HGSO14964 777 aaPredicted RBP8.72□□□□□ -1.01
SSB-207ENST00000465871 ITGA1P56199 1179 aa8.72□□□□□ -1.01
SSB-207ENST00000465871 EMC4Q5J8M3 183 aa8.72□□□□□ -1.01
SSB-207ENST00000465871 LCE5AQ5TCM9 118 aa8.72□□□□□ -1.01
SSB-207ENST00000465871 STEAP3Q658P3 488 aa8.72□□□□□ -1.01
SSB-207ENST00000465871 TTLL6Q8N841 843 aa8.72□□□□□ -1.01
SSB-207ENST00000465871 BDH2Q9BUT1 245 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms